BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0770
(591 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119187-1|AAM51047.1| 115|Drosophila melanogaster SD11171p pro... 29 4.7
AE014297-3055|AAN13887.1| 203|Drosophila melanogaster CG31174-P... 29 4.7
>AY119187-1|AAM51047.1| 115|Drosophila melanogaster SD11171p
protein.
Length = 115
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 263 NCQYTIVIFCKLYVHISELHIIIIKVTRFSSVFVLYCDGNV 141
NC Y + C+LY +IS+ H I +F FV++ + +
Sbjct: 42 NCTYFMQNTCQLYQNISKSHPKIENSVKFDEDFVMHMEPEI 82
>AE014297-3055|AAN13887.1| 203|Drosophila melanogaster CG31174-PA
protein.
Length = 203
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 263 NCQYTIVIFCKLYVHISELHIIIIKVTRFSSVFVLYCDGNV 141
NC Y + C+LY +IS+ H I +F FV++ + +
Sbjct: 42 NCTYFMQNTCQLYQNISKSHPKIENSVKFDEDFVMHMEPEI 82
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,134,538
Number of Sequences: 53049
Number of extensions: 337063
Number of successful extensions: 821
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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