Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0770
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016449-6|AAG23999.1|  331|Caenorhabditis elegans Seven tm rece...    32   0.35 
AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z92830-7|CAB07360.1|  659|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U80024-9|AAK18886.1|  300|Caenorhabditis elegans Serpentine rece...    28   5.7  

>AF016449-6|AAG23999.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 40 protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = -2

Query: 269 FINCQYTIVIFCKLYVHI 216
           FI+CQY+I+IFC + +H+
Sbjct: 208 FISCQYSIIIFCAVQMHL 225


>AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical
           protein F53G2.1 protein.
          Length = 714

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 431 NYLLDKIL*Y**FKCCVEVNSDTHTSKEDTLNMENISN 544
           NY + +   Y  +KC  E+N+  + +K+D LN  N  N
Sbjct: 312 NYFVARRKEYAVWKCLKEINTHVYNTKDDELNHTNFIN 349


>Z92830-7|CAB07360.1|  659|Caenorhabditis elegans Hypothetical
           protein F11A5.8 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -2

Query: 326 RLSLKCLYCNVLIFFF--HI---IFINCQYTIVIFCKLYVHISELHIIIIKVTRFSSVFV 162
           RL ++CL    + F F  H+   IF+N    + IF  +  ++   ++  +K+T+ S +F 
Sbjct: 2   RLDIQCLRGLAIFFVFTYHLYPTIFVNGYLGVDIFFVISGYLMARNLAHVKITKVSQIFG 61

Query: 161 LY 156
            Y
Sbjct: 62  FY 63


>U80024-9|AAK18886.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 10 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
 Frame = -2

Query: 293 LIFFFHIIFINCQYTI-----VIFCKLYVHISE 210
           +IFFF+ IF++  Y +     +IFC LY + +E
Sbjct: 52  MIFFFYRIFVDISYGVLACAYMIFCILYSYFTE 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,631,955
Number of Sequences: 27780
Number of extensions: 184787
Number of successful extensions: 444
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)