Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0768
         (549 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010           31   0.46 
04_04_0670 - 27128153-27129075,27129152-27129266,27129348-271295...    30   1.1  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    28   5.6  
03_02_0408 - 8205897-8205932,8206026-8206055,8207035-8207133,820...    27   7.5  
01_01_0449 + 3335408-3335479,3336310-3336389,3336911-3336989,333...    27   9.9  

>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
          Length = 520

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -2

Query: 323 REQTQAAKRRSSSCESKIIRI*FDKSSERNEKVANIGFARRPRVSGQQPIR 171
           R +T+ +   S +     IR+ F  +++R +  A  G + +PRV+ Q P++
Sbjct: 131 RLRTEVSSSPSQTRNGVNIRVKFTPTNQRRDPEATTGMSMKPRVTEQSPVK 181


>04_04_0670 -
           27128153-27129075,27129152-27129266,27129348-27129537,
           27129652-27129786,27129874-27129971,27131075-27131764
          Length = 716

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 233 EKVANIGFARRPRVSGQQPIRTQKAVALVRPKMHGSEEPITPVKSIKNIPAAPFVPT 63
           + +A +GFA RP    +  +    AVA     + G + P     SI+ +P+   +PT
Sbjct: 107 QALARLGFAARPFTRQENTVVQTCAVACYSIAVGGQDHPPLHPSSIRRLPSLMEIPT 163


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 128 SEEPITPVKSIKNIPAAPFVPTKSS 54
           +E P+TP  S+   P +P+ P+KS+
Sbjct: 190 AEAPLTPSNSLNMEPPSPYYPSKSA 214


>03_02_0408 -
           8205897-8205932,8206026-8206055,8207035-8207133,
           8208084-8208156,8208765-8208964
          Length = 145

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 400 KWRSAAAFFMNKTGEVDSSGT-TGRPSVNKLRRQNAGAV 287
           KWR    F   KT + DSS T T RP V  L R     V
Sbjct: 77  KWRKTEGFKAKKTSQRDSSRTVTTRPKVVGLVRTQRALV 115


>01_01_0449 +
           3335408-3335479,3336310-3336389,3336911-3336989,
           3337342-3337423,3337820-3337976,3338660-3338717,
           3338718-3338828,3339211-3339257,3339820-3339948,
           3340750-3340834,3341264-3341344,3341881-3341886
          Length = 328

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 341 DDGKAVREQTQAAKRRSSSCES 276
           DDG+ + E   AAK RS SC S
Sbjct: 129 DDGQKLSEAISAAKVRSESCSS 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,761,819
Number of Sequences: 37544
Number of extensions: 315832
Number of successful extensions: 843
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)