Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0768
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003480-1|AAO39483.1|  853|Drosophila melanogaster RE58242p pro...    31   1.4  
AE014298-1852|AAF48232.2|  853|Drosophila melanogaster CG32645-P...    31   1.4  
AE014297-428|AAN13236.1|  323|Drosophila melanogaster CG15594-PB...    29   3.1  
AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,...    29   5.5  
AE014298-1574|AAN09290.1|  863|Drosophila melanogaster CG32668-P...    28   7.2  

>BT003480-1|AAO39483.1|  853|Drosophila melanogaster RE58242p
           protein.
          Length = 853

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 43  SLYSEDLVGTNGAAGIFLILFTGVMGSSLPCILGLTRATAFWVLIG 180
           S+YSE L+  +       I    V   ++PCI GL   +  WV++G
Sbjct: 417 SIYSELLLSFSAITNFNAICDRNVGADTIPCIHGLRAFSMAWVILG 462


>AE014298-1852|AAF48232.2|  853|Drosophila melanogaster CG32645-PB
           protein.
          Length = 853

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 43  SLYSEDLVGTNGAAGIFLILFTGVMGSSLPCILGLTRATAFWVLIG 180
           S+YSE L+  +       I    V   ++PCI GL   +  WV++G
Sbjct: 417 SIYSELLLSFSAITNFNAICDRNVGADTIPCIHGLRAFSMAWVILG 462


>AE014297-428|AAN13236.1|  323|Drosophila melanogaster CG15594-PB,
           isoform B protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = +1

Query: 61  LVGTNGAAGIFLILFTGVM 117
           LVGT G AG F  LFT VM
Sbjct: 285 LVGTTGLAGFFFALFTAVM 303


>AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,
           isoform B protein.
          Length = 3183

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 194 VSGQQPIRTQKAVALVRPKMHGSEEP 117
           ++G QP++T KA  +  P  H ++EP
Sbjct: 516 ITGTQPLQTAKACLVTEPNQHLNKEP 541


>AE014298-1574|AAN09290.1|  863|Drosophila melanogaster CG32668-PA
           protein.
          Length = 863

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -3

Query: 478 LEQRPCYQNVVDRNTHKYAKKSPIQQKWRSAAAFFMNKTGEVDSSGTTGRPSVNKLRRQN 299
           + ++P   +  DR   + AK   ++     A+   +NK G V SSGT+G       RR+ 
Sbjct: 22  MAKQPADSDKSDRQ-QQLAKHHQMRHHQPHASEQSLNKLGLV-SSGTSGMG-----RRKT 74

Query: 298 AGAVLAKAKLFESSSIN 248
           +  ++++AK+F   S+N
Sbjct: 75  SAELISEAKMFLGESVN 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,671,776
Number of Sequences: 53049
Number of extensions: 534307
Number of successful extensions: 1479
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)