BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0768 (549 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 31 0.41 U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 31 0.72 U23450-4|AAN39679.1| 130|Caenorhabditis elegans Hypothetical pr... 29 1.7 U23450-3|AAN39678.1| 132|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 29 2.2 U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 29 2.9 Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 28 5.1 Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 28 5.1 AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 28 5.1 AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 28 5.1 AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 28 5.1 Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 8.9 >AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical protein Y56A3A.6 protein. Length = 798 Score = 31.5 bits (68), Expect = 0.41 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 448 VDRNTHKYAKKSPIQQKWRSAAAFFMNKTGEVDSSGTTGRPSV 320 VD+N + Y + P++ K R ++ M + VD + T PSV Sbjct: 536 VDQNGNNYQRSKPVEVKPRPVSSPLMIRAASVDQNPMTASPSV 578 >U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical protein ZK1127.2 protein. Length = 565 Score = 30.7 bits (66), Expect = 0.72 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -3 Query: 349 SSGTTGRPSVNKLRRQNAGAVLAKAK 272 SSGTTGRP +L +N GA+L AK Sbjct: 191 SSGTTGRPKGCQLTHRNIGAMLDVAK 216 >U23450-4|AAN39679.1| 130|Caenorhabditis elegans Hypothetical protein C30B5.2b protein. Length = 130 Score = 29.5 bits (63), Expect = 1.7 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +1 Query: 1 VTFLIGDDILFVLHSLYSEDLVGTNGAAGIFLILFTGVMGS--SLPCIL 141 +TF + + ++ + ED+ GTN + L + TG++ S +LP +L Sbjct: 37 ITFYVLSPVPLLIARRFQEDMTGTNACIELALFITTGIVISAFALPIVL 85 >U23450-3|AAN39678.1| 132|Caenorhabditis elegans Hypothetical protein C30B5.2a protein. Length = 132 Score = 29.5 bits (63), Expect = 1.7 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +1 Query: 1 VTFLIGDDILFVLHSLYSEDLVGTNGAAGIFLILFTGVMGS--SLPCIL 141 +TF + + ++ + ED+ GTN + L + TG++ S +LP +L Sbjct: 39 ITFYVLSPVPLLIARRFQEDMTGTNACIELALFITTGIVISAFALPIVL 87 >Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical protein C44H4.2 protein. Length = 738 Score = 29.1 bits (62), Expect = 2.2 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = -3 Query: 325 SVNKLRRQNAGAVLAKAKLFESSSINHLNEMKKLPISALRGVPGLV 188 S NK+++ + A + E +NH N ++K+P +AL G+P L+ Sbjct: 58 SQNKIKKIDDAAFAGINPVLEEVVLNH-NLIEKVPAAALAGLPNLL 102 >U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical protein K11G12.6b protein. Length = 766 Score = 28.7 bits (61), Expect = 2.9 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = +3 Query: 312 SLFTDGLPVVPELSTSPVLFMKKAAALRHFCCIGLFLAYLCVFR 443 S+F LP++ S +L + + L+ FC +GLFL+ +++ Sbjct: 196 SIFQCRLPLLR--SVCQILHLSPSVGLQAFCLVGLFLSAFAIYK 237 >Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical protein ZK637.7b protein. Length = 644 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254 +G PSVN L R ++ +LAKA L +ESSS Sbjct: 66 NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97 >Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical protein ZK637.7a protein. Length = 642 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254 +G PSVN L R ++ +LAKA L +ESSS Sbjct: 66 NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97 >AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. Length = 642 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254 +G PSVN L R ++ +LAKA L +ESSS Sbjct: 66 NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97 >AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. Length = 644 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254 +G PSVN L R ++ +LAKA L +ESSS Sbjct: 66 NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97 >AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical protein Y54E10BR.2 protein. Length = 191 Score = 27.9 bits (59), Expect = 5.1 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -3 Query: 325 SVNKLRRQNAGAVLAKAKLFESSSINHLNEMKKLPISALRG 203 +VNK + A A L E NH +++ LP+SAL G Sbjct: 132 AVNKSEMEGAAAAAEVRMLLEDD--NHRSDLAVLPVSALEG 170 >Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical protein C09G5.6 protein. Length = 948 Score = 27.1 bits (57), Expect = 8.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 188 GQQPIRTQKAVALVRPKMHGSEEPITPV 105 GQ P+ T + V+P+ E+P+ PV Sbjct: 879 GQVPVETSVPMQQVKPESSAEEKPVPPV 906 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,851,202 Number of Sequences: 27780 Number of extensions: 279615 Number of successful extensions: 849 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 823 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 849 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1113119490 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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