Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0768
         (549 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    31   0.41 
U58758-13|AAB93427.1|  565|Caenorhabditis elegans Hypothetical p...    31   0.72 
U23450-4|AAN39679.1|  130|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U23450-3|AAN39678.1|  132|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z11115-14|CAC42391.1|  644|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z11115-13|CAA77454.2|  642|Caenorhabditis elegans Hypothetical p...    28   5.1  
AF269694-1|AAF76193.1|  642|Caenorhabditis elegans LIN-9S protein.     28   5.1  
AF269693-1|AAF76192.1|  644|Caenorhabditis elegans LIN-9L protein.     28   5.1  
AC024812-5|AAF59556.1|  191|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 448 VDRNTHKYAKKSPIQQKWRSAAAFFMNKTGEVDSSGTTGRPSV 320
           VD+N + Y +  P++ K R  ++  M +   VD +  T  PSV
Sbjct: 536 VDQNGNNYQRSKPVEVKPRPVSSPLMIRAASVDQNPMTASPSV 578


>U58758-13|AAB93427.1|  565|Caenorhabditis elegans Hypothetical
           protein ZK1127.2 protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -3

Query: 349 SSGTTGRPSVNKLRRQNAGAVLAKAK 272
           SSGTTGRP   +L  +N GA+L  AK
Sbjct: 191 SSGTTGRPKGCQLTHRNIGAMLDVAK 216


>U23450-4|AAN39679.1|  130|Caenorhabditis elegans Hypothetical
           protein C30B5.2b protein.
          Length = 130

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   VTFLIGDDILFVLHSLYSEDLVGTNGAAGIFLILFTGVMGS--SLPCIL 141
           +TF +   +  ++   + ED+ GTN    + L + TG++ S  +LP +L
Sbjct: 37  ITFYVLSPVPLLIARRFQEDMTGTNACIELALFITTGIVISAFALPIVL 85


>U23450-3|AAN39678.1|  132|Caenorhabditis elegans Hypothetical
           protein C30B5.2a protein.
          Length = 132

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   VTFLIGDDILFVLHSLYSEDLVGTNGAAGIFLILFTGVMGS--SLPCIL 141
           +TF +   +  ++   + ED+ GTN    + L + TG++ S  +LP +L
Sbjct: 39  ITFYVLSPVPLLIARRFQEDMTGTNACIELALFITTGIVISAFALPIVL 87


>Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical
           protein C44H4.2 protein.
          Length = 738

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 325 SVNKLRRQNAGAVLAKAKLFESSSINHLNEMKKLPISALRGVPGLV 188
           S NK+++ +  A      + E   +NH N ++K+P +AL G+P L+
Sbjct: 58  SQNKIKKIDDAAFAGINPVLEEVVLNH-NLIEKVPAAALAGLPNLL 102


>U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical
           protein K11G12.6b protein.
          Length = 766

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 312 SLFTDGLPVVPELSTSPVLFMKKAAALRHFCCIGLFLAYLCVFR 443
           S+F   LP++   S   +L +  +  L+ FC +GLFL+   +++
Sbjct: 196 SIFQCRLPLLR--SVCQILHLSPSVGLQAFCLVGLFLSAFAIYK 237


>Z11115-14|CAC42391.1|  644|Caenorhabditis elegans Hypothetical
           protein ZK637.7b protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254
           +G    PSVN L R ++  +LAKA L +ESSS
Sbjct: 66  NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97


>Z11115-13|CAA77454.2|  642|Caenorhabditis elegans Hypothetical
           protein ZK637.7a protein.
          Length = 642

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254
           +G    PSVN L R ++  +LAKA L +ESSS
Sbjct: 66  NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97


>AF269694-1|AAF76193.1|  642|Caenorhabditis elegans LIN-9S protein.
          Length = 642

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254
           +G    PSVN L R ++  +LAKA L +ESSS
Sbjct: 66  NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97


>AF269693-1|AAF76192.1|  644|Caenorhabditis elegans LIN-9L protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 SGTTGRPSVNKLRRQNAGAVLAKAKL-FESSS 254
           +G    PSVN L R ++  +LAKA L +ESSS
Sbjct: 66  NGGRDSPSVNSLTRNSSLTMLAKAALDYESSS 97


>AC024812-5|AAF59556.1|  191|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.2 protein.
          Length = 191

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 325 SVNKLRRQNAGAVLAKAKLFESSSINHLNEMKKLPISALRG 203
           +VNK   + A A      L E    NH +++  LP+SAL G
Sbjct: 132 AVNKSEMEGAAAAAEVRMLLEDD--NHRSDLAVLPVSALEG 170


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 188 GQQPIRTQKAVALVRPKMHGSEEPITPV 105
           GQ P+ T   +  V+P+    E+P+ PV
Sbjct: 879 GQVPVETSVPMQQVKPESSAEEKPVPPV 906


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,851,202
Number of Sequences: 27780
Number of extensions: 279615
Number of successful extensions: 849
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)