Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0768
         (549 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g53250.1 68414.m06034 expressed protein                             30   1.2  
At5g44790.1 68418.m05491 copper-exporting ATPase / responsive-to...    29   2.0  
At3g54170.1 68416.m05988 FKBP12 interacting protein (FIP37) iden...    28   3.6  
At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo...    27   6.2  
At5g05760.1 68418.m00634 syntaxin 31 (SYP31) / SED5 identical to...    27   6.2  
At3g45660.1 68416.m04933 proton-dependent oligopeptide transport...    27   6.2  
At2g20010.1 68415.m02339 expressed protein                             27   8.3  

>At1g53250.1 68414.m06034 expressed protein
          Length = 363

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 350 QLWDDGKAVREQTQAAKRRSSSCESKIIRI*FDKSSERNEKVANIGFARRPRVSGQQP 177
           QL ++    +EQT+   + ++   ++ +R   +K  ER EK    G  R+P+   + P
Sbjct: 218 QLAEEKARAKEQTKMIAKEAAKARTEKMRRAAEKKKEREEKDRREGKIRKPKQERENP 275


>At5g44790.1 68418.m05491 copper-exporting ATPase /
           responsive-to-antagonist 1 / copper-transporting ATPase
           (RAN1) identical to SP|Q9S7J8
          Length = 1001

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 49  YSEDLVGTNGAAGIFLILFT-GVMGSSLPCILGLTRATAFWVLIG 180
           Y ++ +  NG   +F ++F+  V+  + PC LGL   TA  V  G
Sbjct: 587 YPDEWLPENGTHFVFSLMFSISVVVIACPCALGLATPTAVMVATG 631


>At3g54170.1 68416.m05988 FKBP12 interacting protein (FIP37)
           identical to FKBP12 interacting protein (FIP37)
           GI:3859944 from [Arabidopsis thaliana]
          Length = 330

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
 Frame = -2

Query: 332 KAVREQTQAAKRRSSSCESKIIRI*FDKSSERNEKVANIGFARRPRVSGQQPIRTQKAVA 153
           K+++EQ + AKR+ +SC   I++      ++R +++A +  A R   S  +P   Q    
Sbjct: 118 KSLKEQLEIAKRKEASC---IVQY-----AKREQEMAELKSAVRDLKSQLKPASMQARRL 169

Query: 152 LVRPKMHGS--------EEPITPVKSIK-NIPAAPFVP 66
           L+ P +H          EE    +K ++ NI A  F P
Sbjct: 170 LLDPAIHEEFSRLKNLVEEKDKKIKELQDNIAAVTFTP 207


>At5g21930.1 68418.m02545 ATPase E1-E2 type family protein /
           haloacid dehalogenase-like hydrolase family protein /
           heavy-metal-associated domain-containing protein
           contains InterPro accession IPR001757: ATPase, E1-E2
           type; contains Pfam profiles PF00403:
           Heavy-metal-associated domain, PF00702: haloacid
           dehalogenase-like hydrolase
          Length = 883

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 58  DLVGTNG-AAGIFLILFTGVMGSSLPCILGLTRATAFWVLIG 180
           D+ G +G A  + L L   V+  S PC LGL   TA  +LIG
Sbjct: 480 DIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTA--ILIG 519


>At5g05760.1 68418.m00634 syntaxin 31 (SYP31) / SED5 identical to
           SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis
           thaliana}
          Length = 336

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 457 QNVVDRNTHKYAKKSPIQQKWRSAAAFFMNKTGEVDSSGTTGRPSVNKLRRQNA 296
           +N VD      AK  P    W S++  F N    +     TG P  ++LRR++A
Sbjct: 169 KNAVDSPPQNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQLRRRSA 222


>At3g45660.1 68416.m04933 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 557

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = -2

Query: 176 IRTQKAVALVRPKMHGSEEPITPVKSIKNIPAAPF-----VPTKSSLYNEWR 36
           IR +KAV     K + SE   TP KS +    A       V +  +++N+WR
Sbjct: 251 IRKRKAVVSTNEKDYHSESKKTPTKSFRFFNRAALKQDDEVNSDGTIHNQWR 302


>At2g20010.1 68415.m02339 expressed protein
          Length = 834

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 358 EVDSSGTTGRPSVNKLRRQNAGAVLAKAKLFESS 257
           E++SSG   R ++N+L      A+ AK K+FE S
Sbjct: 596 EIESSG---RKTLNRLPESEVAALDAKGKIFEQS 626


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,042,077
Number of Sequences: 28952
Number of extensions: 256354
Number of successful extensions: 696
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)