Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0766
         (210 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical ...    26   4.2  
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl...    25   9.7  
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ...    25   9.7  

>AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical
           protein Y60A3A.14 protein.
          Length = 362

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 46  HN*ICGYF*VIFRITACTFTCSLLINRYPTKLFLDKS*CFY 168
           H+ I  YF + F  TACT       N+YP+++F+  + C++
Sbjct: 172 HHTISLYFLLPF--TACT-AILFYFNKYPSRVFVGDTFCYW 209


>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical protein
            ZK675.1 protein.
          Length = 1405

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 126  PIYEQRTSERAGGNTKNYLKIPTNLIMFFKQA 31
            P+ +   S R+GG+  +    P+ L+M+ +QA
Sbjct: 1350 PLPKNANSSRSGGDDSDEDDEPSGLVMYSRQA 1381


>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
           protein 23 protein.
          Length = 1043

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 135 CWIPIYEQRTS-ERAGGNTKNYLKIPTNLI 49
           CW    E R S  R   NT+NYLK+  +L+
Sbjct: 756 CWNENPEVRPSIRRVRLNTENYLKVKGSLV 785


>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1073

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 135 CWIPIYEQRTS-ERAGGNTKNYLKIPTNLI 49
           CW    E R S  R   NT+NYLK+  +L+
Sbjct: 786 CWNENPEVRPSIRRVRLNTENYLKVKGSLV 815


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,334,413
Number of Sequences: 27780
Number of extensions: 66932
Number of successful extensions: 115
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)