Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0766
         (210 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   4.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   4.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   8.5  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 2.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 200 RNFLSEISHTQ 168
           RN  +E+SHTQ
Sbjct: 688 RNLAAEVSHTQ 698


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 135 CWIPIYEQRTSERAGGNTKN 76
           CW P + QR       N+K+
Sbjct: 297 CWAPFHAQRLLAVYAQNSKD 316


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 131 GYLFMSNEQVNVQAVIRKIT*K 66
           G+LF+++  + VQAV  K+  K
Sbjct: 8   GFLFLASLCLLVQAVPNKVADK 29


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 131 GYLFMSNEQVNVQAVIRKIT*K 66
           G+LF+++  + VQAV  K+  K
Sbjct: 8   GFLFLASLCLLVQAVPNKVADK 29


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 81  KNYLKIPTNLIMFFKQAYLYL 19
           + ++  PT L  F +Q  LYL
Sbjct: 79  QQHILSPTQLQSFMQQHSLYL 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,997
Number of Sequences: 438
Number of extensions: 936
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)