Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0765
         (599 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5UQ55 Cluster: Uncharacterized protein L711; n=1; Acan...    34   2.9  
UniRef50_A7CRY6 Cluster: Transcriptional regulator, TetR family;...    33   5.1  

>UniRef50_Q5UQ55 Cluster: Uncharacterized protein L711; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L711 - Mimivirus
          Length = 374

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
 Frame = -2

Query: 511 NVRLKVFMDGPP-SFQVKL-LRNTCPLTFS----IALKLNQICMELQQRP*RQTQANFLT 350
           N+ L   + G P   ++KL + NT PL F+    I  K+++I   +++    Q Q N  T
Sbjct: 221 NISLSYILIGAPIENEIKLFILNTVPLAFNTIHVINTKISKINRTIEELS-SQKQYNSYT 279

Query: 349 PYKFELTLTRSRS*KTKHTKRRLLNQNEPPKIMGNHRTRL 230
             +FE  +  +   K  HTK +LL  +   K +     +L
Sbjct: 280 IQEFESEIKTNPKIKNNHTKEKLLKLHSEQKSLSEKINKL 319


>UniRef50_A7CRY6 Cluster: Transcriptional regulator, TetR family;
           n=1; Opitutaceae bacterium TAV2|Rep: Transcriptional
           regulator, TetR family - Opitutaceae bacterium TAV2
          Length = 272

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -2

Query: 514 NNVRLKVFMDGPPSFQVKLLRNTCPLTFSIALKLNQICMELQQRP*RQTQANF 356
           N + L+VF DG    Q+ +L+N  P+ + +A  L ++C +   RP    +A F
Sbjct: 126 NGLLLRVFADGFAEAQILVLKNFAPMQYRVAELLTKLCPD--DRPEHDMEAWF 176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,895,544
Number of Sequences: 1657284
Number of extensions: 8693644
Number of successful extensions: 16099
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16098
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)