Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0765
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 259 WEAHFDSTVSFLCA*FFNFSTALKLTQICMELESLPAFAARGAVATPYK 405
           +E  F S +S  C+  F    ALK+ ++   +E +       AV  PYK
Sbjct: 91  FEEVFSSLLS-CCSVIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVPYK 138


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 259 WEAHFDSTVSFLCA*FFNFSTALKLTQICMELESLPAFAARGAVATPYK 405
           +E  F S +S  C+  F    ALK+ ++   +E +       AV  PYK
Sbjct: 91  FEEVFSSLLS-CCSVIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVPYK 138


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 475 SFQVKLLRNTCPLTFSIALKLNQICMELQQR 383
           +F   LL  TC    S + KL  +C E Q R
Sbjct: 268 TFGTILLIMTCSGVHSESQKLVGVCYEYQDR 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,672
Number of Sequences: 336
Number of extensions: 2515
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)