Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0765
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031285-1|AAH31285.1|  707|Homo sapiens FBXL13 protein protein.       30   7.1  
BC026121-1|AAH26121.1|  684|Homo sapiens FBXL13 protein protein.       30   7.1  
BC020572-1|AAH20572.2|  569|Homo sapiens FBXL13 protein protein.       30   7.1  
AY359239-1|AAR13263.1|  690|Homo sapiens F-box and leucine-rich ...    30   7.1  
AK097537-1|BAC05092.1|  735|Homo sapiens protein ( Homo sapiens ...    30   7.1  
AC005250-1|AAP22333.1|  325|Homo sapiens unknown protein.              30   7.1  

>BC031285-1|AAH31285.1|  707|Homo sapiens FBXL13 protein protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 523 IRFNNVRLKVFMDGPPSFQVKLLR--NTCPLTFSIALKLNQICMEL 392
           +R  ++ LK F+DGP S +++ L   N   L+ +  +KL++ C  L
Sbjct: 462 VRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 507


>BC026121-1|AAH26121.1|  684|Homo sapiens FBXL13 protein protein.
          Length = 684

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 523 IRFNNVRLKVFMDGPPSFQVKLLR--NTCPLTFSIALKLNQICMEL 392
           +R  ++ LK F+DGP S +++ L   N   L+ +  +KL++ C  L
Sbjct: 552 VRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 597


>BC020572-1|AAH20572.2|  569|Homo sapiens FBXL13 protein protein.
          Length = 569

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 523 IRFNNVRLKVFMDGPPSFQVKLLR--NTCPLTFSIALKLNQICMEL 392
           +R  ++ LK F+DGP S +++ L   N   L+ +  +KL++ C  L
Sbjct: 296 VRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 341


>AY359239-1|AAR13263.1|  690|Homo sapiens F-box and leucine-rich
           repeat protein 13 transcript variant 2 protein.
          Length = 690

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 523 IRFNNVRLKVFMDGPPSFQVKLLR--NTCPLTFSIALKLNQICMEL 392
           +R  ++ LK F+DGP S +++ L   N   L+ +  +KL++ C  L
Sbjct: 462 VRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 507


>AK097537-1|BAC05092.1|  735|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40218 fis, clone TESTI2021599. ).
          Length = 735

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 523 IRFNNVRLKVFMDGPPSFQVKLLR--NTCPLTFSIALKLNQICMEL 392
           +R  ++ LK F+DGP S +++ L   N   L+ +  +KL++ C  L
Sbjct: 462 VRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 507


>AC005250-1|AAP22333.1|  325|Homo sapiens unknown protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 523 IRFNNVRLKVFMDGPPSFQVKLLR--NTCPLTFSIALKLNQICMEL 392
           +R  ++ LK F+DGP S +++ L   N   L+ +  +KL++ C  L
Sbjct: 169 VRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,565,168
Number of Sequences: 237096
Number of extensions: 1360322
Number of successful extensions: 2584
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2584
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)