Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0765
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical pr...    29   2.5  

>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 241 CGFP*SWEAHFDSTVSFLCA*FFNFSTALKLTQIC 345
           C FP + E HF   V   CA FF  + +L +  +C
Sbjct: 14  CEFPSNVELHFGGLVCGACAAFFRRTVSLNIRYLC 48


>Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical
           protein E03H4.6 protein.
          Length = 382

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 241 CGFP*SWEAHFDSTVSFLCA*FFNFSTALKLTQIC 345
           C FP + E HF   V   CA FF  + +L +  +C
Sbjct: 68  CEFPSNVELHFGGLVCGACAAFFRRTVSLNIRYLC 102


>Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical
           protein R10D12.2 protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 268 HFDSTVSFLCA*FFNFSTALKLTQICME 351
           HF ST    CA FF  + +LK+  +C +
Sbjct: 65  HFGSTTCLACASFFRRTVSLKIQYVCKQ 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,392,494
Number of Sequences: 27780
Number of extensions: 220026
Number of successful extensions: 442
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)