Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0763
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1305|AAF50525.3| 1571|Drosophila melanogaster CG7462-PB...    29   2.5  
AY122260-1|AAM52772.1| 1253|Drosophila melanogaster SD09478p pro...    29   3.3  
AJ421624-1|CAD13484.1| 1253|Drosophila melanogaster Eps-15 prote...    29   3.3  
AE013599-3950|AAF47267.2| 1253|Drosophila melanogaster CG16932-P...    29   3.3  
AE013599-3949|AAM70793.1| 1232|Drosophila melanogaster CG16932-P...    29   3.3  
AE013599-3948|AAM70792.1| 1106|Drosophila melanogaster CG16932-P...    29   3.3  

>AE014296-1305|AAF50525.3| 1571|Drosophila melanogaster CG7462-PB,
            isoform B protein.
          Length = 1571

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -1

Query: 363  YCDSLGK-LYQRYPRV*VLSGLKPE---VLLTLTLPRAVLPDSTNRSKTRSTEKIR 208
            + D +G+ L+ + P+V    G  P+    +L + LP AV+PDST     R T   R
Sbjct: 1350 HADIVGRTLFMKEPKV--AKGEPPQQPICILNIVLPEAVIPDSTTAFSDRVTSAYR 1403


>AY122260-1|AAM52772.1| 1253|Drosophila melanogaster SD09478p
           protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 346 EVISALPSRVGALGAKTGGVANTDLTKSSASRF-YQQIENAIH 221
           E+   +PSR+  +   +GGVAN D +     R  Y+Q+  ++H
Sbjct: 103 ELPKTMPSRIQTVPVASGGVANGDWSIGVIDRLKYEQLFESLH 145


>AJ421624-1|CAD13484.1| 1253|Drosophila melanogaster Eps-15 protein
           protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 346 EVISALPSRVGALGAKTGGVANTDLTKSSASRF-YQQIENAIH 221
           E+   +PSR+  +   +GGVAN D +     R  Y+Q+  ++H
Sbjct: 103 ELPKTMPSRIQTVPVASGGVANGDWSIGVIDRLKYEQLFESLH 145


>AE013599-3950|AAF47267.2| 1253|Drosophila melanogaster CG16932-PA,
           isoform A protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 346 EVISALPSRVGALGAKTGGVANTDLTKSSASRF-YQQIENAIH 221
           E+   +PSR+  +   +GGVAN D +     R  Y+Q+  ++H
Sbjct: 103 ELPKTMPSRIQTVPVASGGVANGDWSIGVIDRLKYEQLFESLH 145


>AE013599-3949|AAM70793.1| 1232|Drosophila melanogaster CG16932-PB,
           isoform B protein.
          Length = 1232

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 346 EVISALPSRVGALGAKTGGVANTDLTKSSASRF-YQQIENAIH 221
           E+   +PSR+  +   +GGVAN D +     R  Y+Q+  ++H
Sbjct: 103 ELPKTMPSRIQTVPVASGGVANGDWSIGVIDRLKYEQLFESLH 145


>AE013599-3948|AAM70792.1| 1106|Drosophila melanogaster CG16932-PC,
           isoform C protein.
          Length = 1106

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 346 EVISALPSRVGALGAKTGGVANTDLTKSSASRF-YQQIENAIH 221
           E+   +PSR+  +   +GGVAN D +     R  Y+Q+  ++H
Sbjct: 103 ELPKTMPSRIQTVPVASGGVANGDWSIGVIDRLKYEQLFESLH 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,253,959
Number of Sequences: 53049
Number of extensions: 352944
Number of successful extensions: 1037
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)