Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0761
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 6e-42
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 8e-42
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 8e-42
SB_56| Best HMM Match : Actin (HMM E-Value=0) 167 8e-42
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 167 1e-41
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 145 3e-35
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 57 1e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 5e-08
SB_54| Best HMM Match : Actin (HMM E-Value=0) 47 1e-05
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 167 bits (407), Expect = 6e-42
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L NTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 267 LYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 326
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWISKQEYDESGP+IVHRKCF
Sbjct: 327 QQMWISKQEYDESGPAIVHRKCF 349
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P +L PSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 217 PDGQVITIGNERFRCPE-ALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYA 269
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 167 bits (406), Expect = 8e-42
Identities = 78/83 (93%), Positives = 80/83 (96%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L NTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 256 LYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 315
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWISKQEYDESGP+IVHRKCF
Sbjct: 316 QQMWISKQEYDESGPAIVHRKCF 338
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P ++ PSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 206 PDGQVITIGNERFRCPE-AMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 258
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 691 LEKSYELPRRVRSSTMGNERFRCPEALF 608
LEKSYELP + T+GNERFRCPEA+F
Sbjct: 199 LEKSYELPDG-QVITIGNERFRCPEAMF 225
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 167 bits (406), Expect = 8e-42
Identities = 78/83 (93%), Positives = 80/83 (96%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L NTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P ++ PSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 244 PDGQVITIGNERFRCPE-AMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 691 LEKSYELPRRVRSSTMGNERFRCPEALF 608
LEKSYELP + T+GNERFRCPEA+F
Sbjct: 237 LEKSYELPDG-QVITIGNERFRCPEAMF 263
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 167 bits (406), Expect = 8e-42
Identities = 78/83 (93%), Positives = 80/83 (96%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L NTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P ++ PSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 243 PDGQVITIGNERFRCPE-AMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 691 LEKSYELPRRVRSSTMGNERFRCPEALF 608
LEKSYELP + T+GNERFRCPEA+F
Sbjct: 236 LEKSYELPDG-QVITIGNERFRCPEAMF 262
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 167 bits (405), Expect = 1e-41
Identities = 78/83 (93%), Positives = 80/83 (96%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L NTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P ++ PSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 244 PDGQVITIGNERFRCPE-AMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 691 LEKSYELPRRVRSSTMGNERFRCPEALF 608
LEKSYELP + T+GNERFRCPEA+F
Sbjct: 237 LEKSYELPDG-QVITIGNERFRCPEAMF 263
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 165 bits (401), Expect = 3e-41
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L NTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P ++ PSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 243 PDGQVITIGNERFRCPE-AMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 691 LEKSYELPRRVRSSTMGNERFRCPEALF 608
LEKSYELP + T+GNERFRCPEA+F
Sbjct: 236 LEKSYELPDG-QVITIGNERFRCPEAMF 262
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 145 bits (352), Expect = 3e-35
Identities = 66/83 (79%), Positives = 74/83 (89%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
L N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTF
Sbjct: 67 LYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTF 126
Query: 336 QQMWISKQEYDESGPSIVHRKCF 268
QQMWI+K+EY E GP IVHRKCF
Sbjct: 127 QQMWIAKEEYHEYGPPIVHRKCF 149
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
P GQVI G + P ++ P+FLGMEA GIHE YN IMKCDVDIRKDLY+
Sbjct: 17 PDGQVISIGNERFRCPE-AMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYS 69
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 697 PPLEKSYELPRRVRSSTMGNERFRCPEALF 608
P LEK+YELP + ++GNERFRCPEA+F
Sbjct: 8 PILEKTYELPDG-QVISIGNERFRCPEAMF 36
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITA----------------LAPSTMKIKIIAPPERK 385
L +N VLSGG+TM+ R+Q++I + P ++ ++I+ ++
Sbjct: 242 LYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQR 301
Query: 384 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 256
Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 302 YAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/61 (37%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = -3
Query: 519 GLVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILAS 349
GL + +++GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 348 L 346
L
Sbjct: 230 L 230
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1
Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLY 510
P GQ I G + L PS LG + GIHE+ + SI KCD+D+R +L+
Sbjct: 2288 PDGQSIRIGSERFRAAE-PLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELF 2339
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -3
Query: 609 FQPLVLGYGSLRHPRDHI*LHHEVRRGHP*GLVRNTVLSGGTTMYPGIADRMQKEITA-L 433
++ +VL GS +P L E+++ L VL G T+ Q +TA
Sbjct: 298 YKHIVLSGGSTMYPGLPSRLEREIKQ-----LYLERVLKGDTSKLSSGMGMEQIPLTADY 352
Query: 432 APSTMKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 295
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 353 LLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = -3
Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGG 364
L N VL GGT M PG R+ +EI L S +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 363 SILASLSTFQQMWISKQEYDE 301
+I SL +++ Y +
Sbjct: 137 AIFGSLEVLADRSTTRERYQQ 157
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 507 NTVLSGGTTMYPGIADRMQKEITALAP 427
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 628 RCPEALFPTPRSWVWKLAASTRPHITPS*SATWTSVRTCTQ 506
R P + PT + + A+++ +TPS SAT T++RT T+
Sbjct: 123 RVPRCISPTTETLTTETIAASQ--LTPSSSATTTTIRTNTK 161
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 628 RCPEALFPTPRSWVWKLAASTRPHITPS*SATWTSVRTCTQ 506
R P + PT + + A+++ +TPS SAT T++RT T+
Sbjct: 324 RVPRCISPTTETLTTETIAASQ--LTPSSSATTTTIRTNTK 362
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,632,110
Number of Sequences: 59808
Number of extensions: 559323
Number of successful extensions: 1574
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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