Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0761
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             132   2e-33
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.9  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   4.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.4  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  132 bits (320), Expect = 2e-33
 Identities = 63/66 (95%), Positives = 64/66 (96%)
 Frame = -3

Query: 516 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 337
           L  NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTF
Sbjct: 68  LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTF 127

Query: 336 QQMWIS 319
           QQMWIS
Sbjct: 128 QQMWIS 133



 Score = 84.6 bits (200), Expect = 8e-19
 Identities = 40/54 (74%), Positives = 42/54 (77%)
 Frame = -1

Query: 668 PTGQVIHYGKRKIPLPRGSLSNPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 507
           P GQVI  G  +   P  +L  PSFLGMEACGIHETTYNSIMKCDVDIRKDLYA
Sbjct: 18  PDGQVITIGNERFRCPE-ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 70



 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 691 LEKSYELPRRVRSSTMGNERFRCPEALF 608
           LEKSYELP   +  T+GNERFRCPEALF
Sbjct: 11  LEKSYELPDG-QVITIGNERFRCPEALF 37


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 617 GSLSNPSFLGMEACGIHETTYNSI 546
           GSL NPS +    CG  E T   +
Sbjct: 467 GSLLNPSHMYRAVCGRIENTIQGL 490


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 504 CCVQVLTDVHVALHDGVI 557
           C  Q+L  VH   H+GV+
Sbjct: 14  CIQQILESVHHCHHNGVV 31


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 502 RIVRWYHHVPWNRRPYAK 449
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 502 RIVRWYHHVPWNRRPYAK 449
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,390
Number of Sequences: 438
Number of extensions: 5288
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)