BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0759 (536 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0290 + 2246791-2247027,2248089-2248346 126 1e-29 10_08_0310 - 16669565-16669822,16670558-16670794 123 1e-28 06_01_0056 - 478424-478491,478587-478821,478916-478978,479102-47... 30 1.3 03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917... 29 1.8 02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599 29 1.8 08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230... 29 3.1 05_03_0658 + 16711117-16712337 28 4.1 05_03_0549 - 15349259-15349346,15349466-15349585,15349899-153500... 28 5.4 04_04_0947 - 29583775-29583931,29584030-29584256 27 7.2 03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 27 7.2 03_02_0394 - 8081172-8081330,8082015-8082134,8082223-8082271,808... 27 7.2 02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18... 27 7.2 04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 27 9.5 >03_01_0290 + 2246791-2247027,2248089-2248346 Length = 164 Score = 126 bits (303), Expect = 1e-29 Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Frame = +1 Query: 19 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGK 198 M G R TRDLFAR FR G IPL+TY++ YK+GD VD+ NGA KGMPHK YHG+ Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60 Query: 199 TGRVYNVTAHALGVIVNKRFAEGLYRS-ASISVLSMSSTPSADKTSLRESKRMRGY*RKP 375 TGRV+NVT A+GV +NK+ + R + V + + ++ LR+ K + Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQ-LKADA 119 Query: 376 RLHGKTVNLKRQPAPPKAVHIVSGTEKPVLLAPIPYEFV 492 + G+ ++ KRQP PK +V G + PIPY+ V Sbjct: 120 KARGEVISTKRQPEGPKPGFMVEGATLET-VTPIPYDVV 157 >10_08_0310 - 16669565-16669822,16670558-16670794 Length = 164 Score = 123 bits (296), Expect = 1e-28 Identities = 66/159 (41%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Frame = +1 Query: 19 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGK 198 M G R TRDLFAR FR G IPL+TY++ YK+G+ VD+ NGA KGMPHK YHG+ Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60 Query: 199 TGRVYNVTAHALGVIVNKRFAEGLYRS-ASISVLSMSSTPSADKTSLRESKRMRGY*RKP 375 TGRV+NVT A+GV +NK+ + R + V + + ++ LR+ K + Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQ-LKADA 119 Query: 376 RLHGKTVNLKRQPAPPKAVHIVSGTEKPVLLAPIPYEFV 492 + G+ ++ KRQP PK +V G + PIPY+ V Sbjct: 120 KARGEVISTKRQPQGPKPGFMVEGATLET-VTPIPYDVV 157 >06_01_0056 - 478424-478491,478587-478821,478916-478978,479102-479179, 479263-479354,479788-479866,479971-480104,480184-480523 Length = 362 Score = 29.9 bits (64), Expect = 1.3 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 73 FRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGKTGRVYNVTAHALG 237 F T G IP Y+ G + +I +G + G PHK+ R+Y++ + ALG Sbjct: 110 FSTEGEIP-------YREGQSIGVIADGVDKNGKPHKL------RLYSIASSALG 151 >03_02_0955 - 12690405-12690842,12690940-12691130,12691208-12691718, 12692240-12693171,12693260-12693351,12693430-12693509, 12693568-12693621,12693734-12693850,12693949-12694194, 12694273-12694432,12694512-12694576,12694686-12694877, 12694980-12695061,12695153-12695925 Length = 1310 Score = 29.5 bits (63), Expect = 1.8 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +3 Query: 279 RINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAARQDRQPEETASSP 422 ++N+ + H K S R ++ E ER A+AA + PEE A P Sbjct: 1207 KVNL-LRHAKRSVARDFKIQSKDELERNSTAARAASSENMPEEDAEGP 1253 >02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599 Length = 99 Score = 29.5 bits (63), Expect = 1.8 Identities = 9/39 (23%), Positives = 27/39 (69%) Frame = +3 Query: 303 VKHSKCRQDFLKRVKENERLLKEAKAARQDRQPEETASS 419 ++ +KCRQD++ VK++ +L+++ A + ++ ++ + + Sbjct: 1 MRQAKCRQDYMAIVKQSRQLIEKLDAKNEPKKRQKRSKN 39 >08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715, 2304824-2305096,2305454-2305558,2305635-2305851, 2306012-2306262,2306518-2306724,2307087-2307351, 2308655-2308749 Length = 580 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +3 Query: 126 WRHCRHHRQWCISKGYATQSIPWKDRSRVQRDCS 227 W H QW YAT+ I W+ R+ V D S Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALVISDWS 568 >05_03_0658 + 16711117-16712337 Length = 406 Score = 28.3 bits (60), Expect = 4.1 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = -3 Query: 258 EPLVDNHTESMSSHVVHATCLSMVYFVWHTLLKCTIAYDVYNVSNFVHFHVRGERNSSMC 79 EP + + M S+ + M VW + + I DV + + F++ H+R R C Sbjct: 270 EPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEAC 329 >05_03_0549 - 15349259-15349346,15349466-15349585,15349899-15350020, 15350511-15350783,15351398-15351502,15351588-15351804, 15352031-15352281,15352582-15352776,15352881-15353139, 15354617-15354714 Length = 575 Score = 27.9 bits (59), Expect = 5.4 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = +3 Query: 126 WRHCRHHRQWCISKGYATQSIPWKDRSRVQRD 221 W H H QW YA++ W+ R V D Sbjct: 530 WIHVGHSTQWLWYSVYASKQFSWRTRMLVVSD 561 >04_04_0947 - 29583775-29583931,29584030-29584256 Length = 127 Score = 27.5 bits (58), Expect = 7.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +3 Query: 315 KCRQDFLKRVKENERLLKEAKAARQDRQPEETASSP 422 +CRQ+ ++ + E+ K+ A Q+RQ ++ AS P Sbjct: 85 ECRQEQIEIDEAREQRSKQTGRAEQERQRQQKASHP 120 >03_06_0140 + 31951569-31951710,31951943-31952037,31952141-31953982, 31954065-31954179,31954260-31954897 Length = 943 Score = 27.5 bits (58), Expect = 7.2 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = +1 Query: 268 LYRSASISVLSMSSTPSADKTSLRESKRM 354 +Y+SA++ V + SS P+ADK + + ++M Sbjct: 410 VYKSANLQVSNSSSIPAADKQTRQTMRQM 438 >03_02_0394 - 8081172-8081330,8082015-8082134,8082223-8082271, 8083193-8083371,8083583-8083852,8084480-8084631, 8085694-8085715,8086314-8086430 Length = 355 Score = 27.5 bits (58), Expect = 7.2 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +1 Query: 301 MSSTPSADKTSLRESKRMRGY*RKPRLHGKTVNLKRQPAPPKAVHI 438 + S PS+ T+ RES ++ + +P T ++ P PKAV + Sbjct: 58 IKSNPSSPLTTQRESHKVSTHLVRPSASYSTQASEQNPKEPKAVQV 103 >02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-185183 Length = 366 Score = 27.5 bits (58), Expect = 7.2 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +1 Query: 73 FRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGKTGRVYNVTAHALG 237 F T G IP Y+ G + +I +G + G PHK+ R+Y++ + A+G Sbjct: 114 FSTDGEIP-------YREGQSIGVIPDGIDKNGKPHKL------RLYSIASSAIG 155 >04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928, 9992466-9992555,9992692-9992782,9993530-9993729, 9998024-9998101,9998196-9998312,10000017-10000112, 10000192-10000317,10000533-10000629,10000979-10001023, 10002106-10002179,10002267-10002350,10002439-10002522, 10002660-10002851,10003775-10003903,10004061-10004093, 10004190-10004286,10004833-10004883,10005211-10005289, 10005480-10005552,10005595-10005691,10006392-10006473, 10008345-10008691,10010271-10010535,10010624-10010743, 10010971-10011358 Length = 1219 Score = 27.1 bits (57), Expect = 9.5 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = +3 Query: 324 QDFLKRVKENERLLKEAK---AARQDRQPEETASSP*SCP 434 QD K++K + RLLKEA+ A D Q E+++ P S P Sbjct: 230 QDKEKQLKRDYRLLKEARKQSGASWDNQRPESSAPPESPP 269 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,022,450 Number of Sequences: 37544 Number of extensions: 320159 Number of successful extensions: 1005 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1003 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1186491600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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