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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0759
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0290 + 2246791-2247027,2248089-2248346                          126   1e-29
10_08_0310 - 16669565-16669822,16670558-16670794                      123   1e-28
06_01_0056 - 478424-478491,478587-478821,478916-478978,479102-47...    30   1.3  
03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917...    29   1.8  
02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599     29   1.8  
08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230...    29   3.1  
05_03_0658 + 16711117-16712337                                         28   4.1  
05_03_0549 - 15349259-15349346,15349466-15349585,15349899-153500...    28   5.4  
04_04_0947 - 29583775-29583931,29584030-29584256                       27   7.2  
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539...    27   7.2  
03_02_0394 - 8081172-8081330,8082015-8082134,8082223-8082271,808...    27   7.2  
02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18...    27   7.2  
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999...    27   9.5  

>03_01_0290 + 2246791-2247027,2248089-2248346
          Length = 164

 Score =  126 bits (303), Expect = 1e-29
 Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
 Frame = +1

Query: 19  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGK 198
           M    G R  TRDLFAR FR  G IPL+TY++ YK+GD VD+  NGA  KGMPHK YHG+
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 199 TGRVYNVTAHALGVIVNKRFAEGLYRS-ASISVLSMSSTPSADKTSLRESKRMRGY*RKP 375
           TGRV+NVT  A+GV +NK+    + R    + V  +  +   ++  LR+ K  +      
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQ-LKADA 119

Query: 376 RLHGKTVNLKRQPAPPKAVHIVSGTEKPVLLAPIPYEFV 492
           +  G+ ++ KRQP  PK   +V G      + PIPY+ V
Sbjct: 120 KARGEVISTKRQPEGPKPGFMVEGATLET-VTPIPYDVV 157


>10_08_0310 - 16669565-16669822,16670558-16670794
          Length = 164

 Score =  123 bits (296), Expect = 1e-28
 Identities = 66/159 (41%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
 Frame = +1

Query: 19  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGK 198
           M    G R  TRDLFAR FR  G IPL+TY++ YK+G+ VD+  NGA  KGMPHK YHG+
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60

Query: 199 TGRVYNVTAHALGVIVNKRFAEGLYRS-ASISVLSMSSTPSADKTSLRESKRMRGY*RKP 375
           TGRV+NVT  A+GV +NK+    + R    + V  +  +   ++  LR+ K  +      
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQ-LKADA 119

Query: 376 RLHGKTVNLKRQPAPPKAVHIVSGTEKPVLLAPIPYEFV 492
           +  G+ ++ KRQP  PK   +V G      + PIPY+ V
Sbjct: 120 KARGEVISTKRQPQGPKPGFMVEGATLET-VTPIPYDVV 157


>06_01_0056 -
           478424-478491,478587-478821,478916-478978,479102-479179,
           479263-479354,479788-479866,479971-480104,480184-480523
          Length = 362

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +1

Query: 73  FRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGKTGRVYNVTAHALG 237
           F T G IP       Y+ G  + +I +G  + G PHK+      R+Y++ + ALG
Sbjct: 110 FSTEGEIP-------YREGQSIGVIADGVDKNGKPHKL------RLYSIASSALG 151


>03_02_0955 - 12690405-12690842,12690940-12691130,12691208-12691718,
            12692240-12693171,12693260-12693351,12693430-12693509,
            12693568-12693621,12693734-12693850,12693949-12694194,
            12694273-12694432,12694512-12694576,12694686-12694877,
            12694980-12695061,12695153-12695925
          Length = 1310

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 279  RINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAARQDRQPEETASSP 422
            ++N+ + H K S  R   ++   E ER    A+AA  +  PEE A  P
Sbjct: 1207 KVNL-LRHAKRSVARDFKIQSKDELERNSTAARAASSENMPEEDAEGP 1253


>02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599
          Length = 99

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 9/39 (23%), Positives = 27/39 (69%)
 Frame = +3

Query: 303 VKHSKCRQDFLKRVKENERLLKEAKAARQDRQPEETASS 419
           ++ +KCRQD++  VK++ +L+++  A  + ++ ++ + +
Sbjct: 1   MRQAKCRQDYMAIVKQSRQLIEKLDAKNEPKKRQKRSKN 39


>08_01_0283 -
           2304024-2304111,2304224-2304343,2304594-2304715,
           2304824-2305096,2305454-2305558,2305635-2305851,
           2306012-2306262,2306518-2306724,2307087-2307351,
           2308655-2308749
          Length = 580

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 126 WRHCRHHRQWCISKGYATQSIPWKDRSRVQRDCS 227
           W    H  QW     YAT+ I W+ R+ V  D S
Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALVISDWS 568


>05_03_0658 + 16711117-16712337
          Length = 406

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = -3

Query: 258 EPLVDNHTESMSSHVVHATCLSMVYFVWHTLLKCTIAYDVYNVSNFVHFHVRGERNSSMC 79
           EP +  +   M S+ +      M   VW  + +  I  DV + + F++ H+R  R    C
Sbjct: 270 EPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEAC 329


>05_03_0549 -
           15349259-15349346,15349466-15349585,15349899-15350020,
           15350511-15350783,15351398-15351502,15351588-15351804,
           15352031-15352281,15352582-15352776,15352881-15353139,
           15354617-15354714
          Length = 575

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 126 WRHCRHHRQWCISKGYATQSIPWKDRSRVQRD 221
           W H  H  QW     YA++   W+ R  V  D
Sbjct: 530 WIHVGHSTQWLWYSVYASKQFSWRTRMLVVSD 561


>04_04_0947 - 29583775-29583931,29584030-29584256
          Length = 127

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 315 KCRQDFLKRVKENERLLKEAKAARQDRQPEETASSP 422
           +CRQ+ ++  +  E+  K+   A Q+RQ ++ AS P
Sbjct: 85  ECRQEQIEIDEAREQRSKQTGRAEQERQRQQKASHP 120


>03_06_0140 +
           31951569-31951710,31951943-31952037,31952141-31953982,
           31954065-31954179,31954260-31954897
          Length = 943

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +1

Query: 268 LYRSASISVLSMSSTPSADKTSLRESKRM 354
           +Y+SA++ V + SS P+ADK + +  ++M
Sbjct: 410 VYKSANLQVSNSSSIPAADKQTRQTMRQM 438


>03_02_0394 -
           8081172-8081330,8082015-8082134,8082223-8082271,
           8083193-8083371,8083583-8083852,8084480-8084631,
           8085694-8085715,8086314-8086430
          Length = 355

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 301 MSSTPSADKTSLRESKRMRGY*RKPRLHGKTVNLKRQPAPPKAVHI 438
           + S PS+  T+ RES ++  +  +P     T   ++ P  PKAV +
Sbjct: 58  IKSNPSSPLTTQRESHKVSTHLVRPSASYSTQASEQNPKEPKAVQV 103


>02_01_0030 -
           183836-183903,183986-184453,184526-184604,184698-185183
          Length = 366

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 73  FRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGKTGRVYNVTAHALG 237
           F T G IP       Y+ G  + +I +G  + G PHK+      R+Y++ + A+G
Sbjct: 114 FSTDGEIP-------YREGQSIGVIPDGIDKNGKPHKL------RLYSIASSAIG 155


>04_03_0037 -
           9991176-9991268,9991403-9991474,9991569-9991928,
           9992466-9992555,9992692-9992782,9993530-9993729,
           9998024-9998101,9998196-9998312,10000017-10000112,
           10000192-10000317,10000533-10000629,10000979-10001023,
           10002106-10002179,10002267-10002350,10002439-10002522,
           10002660-10002851,10003775-10003903,10004061-10004093,
           10004190-10004286,10004833-10004883,10005211-10005289,
           10005480-10005552,10005595-10005691,10006392-10006473,
           10008345-10008691,10010271-10010535,10010624-10010743,
           10010971-10011358
          Length = 1219

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 324 QDFLKRVKENERLLKEAK---AARQDRQPEETASSP*SCP 434
           QD  K++K + RLLKEA+    A  D Q  E+++ P S P
Sbjct: 230 QDKEKQLKRDYRLLKEARKQSGASWDNQRPESSAPPESPP 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,022,450
Number of Sequences: 37544
Number of extensions: 320159
Number of successful extensions: 1005
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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