Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0759
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 137 5e-33
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.099
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 33 0.099
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 33 0.099
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical ... 29 2.1
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical pr... 28 3.7
AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical... 28 3.7
Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 28 4.9
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 28 4.9
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 28 4.9
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 28 4.9
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 28 4.9
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 28 4.9
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 4.9
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 28 4.9
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 27 6.5
U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF273829-1|AAG15178.1| 372|Caenorhabditis elegans nuclear recep... 27 8.6
AF003384-2|AAL08040.1| 428|Caenorhabditis elegans Acyltransfera... 27 8.6
AF003384-1|AAK71374.2| 415|Caenorhabditis elegans Acyltransfera... 27 8.6
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 27 8.6
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 27 8.6
AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024776-16|AAL32242.1| 363|Caenorhabditis elegans Nuclear horm... 27 8.6
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 137 bits (331), Expect = 5e-33
Identities = 78/162 (48%), Positives = 97/162 (59%), Gaps = 3/162 (1%)
Frame = +1
Query: 19 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIIGNGAFQKGMPHKVYHGK 198
MTNSKG RRGTR +FAR FR HG LSTY YK GD+VDI NGAFQKGMP K YHG+
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGR 60
Query: 199 TGRVYNVTAHALGVIVNKRFAEGLYRSASISVLSMSSTPSADKTSLRESKRMRGY*RK-P 375
TGR++NVT A+G+IVNKR G I++ PS +T + RK
Sbjct: 61 TGRIFNVTRGAVGIIVNKR-VRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAA 119
Query: 376 RLHGKTV-NLKRQPAPPKAVH-IVSGTEKPVLLAPIPYEFVA 495
+ G+ V LKR P P+ H + + +P LLAP+ +E VA
Sbjct: 120 KSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIVA 161
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 203 PVFPWYTLCGIPF*NAPLPMMSTMSPTLYTFMYVESGIVPCVRNLR 66
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 203 PVFPWYTLCGIPF*NAPLPMMSTMSPTLYTFMYVESGIVPCVRNLR 66
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 203 PVFPWYTLCGIPF*NAPLPMMSTMSPTLYTFMYVESGIVPCVRNLR 66
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 397 NLKRQPAPPKAVHIVSGTE 453
NL+R+PAPPK H+ S E
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480
>AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical
protein Y80D3A.9 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 462 DGFLSSTDDVDSFRGSWLSLQVDG 391
DG LS D+ D RG+WL + G
Sbjct: 39 DGMLSGVDEKDVARGTWLGMDAHG 62
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 336 KRVKE-NERLLKEAKAARQDRQPEETASSP*SCPHRQ 443
K+V++ N ++ KEAK + E+T S P SCP ++
Sbjct: 23 KKVRDHNRKVKKEAKKNGTTNKKEKTISVPNSCPFKE 59
>Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical
protein R186.1 protein.
Length = 276
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 462 DGFLSSTDDVDSFRGSWLSLQVDG 391
DG LS D ++ RG+WL L +G
Sbjct: 39 DGILSGVDKQENARGTWLGLNENG 62
>AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical
protein Y45G12C.1 protein.
Length = 378
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 314 GVLDMLNT-DIDALRYNPSANRLLTITPRA*AVTLYTRPVFPWYTLCGI 171
G+LD T DID L+ N + +L + A T +T + W+TLC +
Sbjct: 272 GLLDYFPTFDIDDLKSNEKSLQLSAMLVYL-ARTQFTLDILKWHTLCAL 319
>Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical
protein C35D6.10 protein.
Length = 300
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 419 GAGCLFRLTVLPCSLGFLQ*PLILFDSLKEVLSALGVLDMLN 294
G GC + P +LG++Q ++ ++ VLS+L L +LN
Sbjct: 160 GIGCTVDKDMQPSALGYIQAIILFCMAMSSVLSSLLHLSILN 201
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 189 EDEVKRIKQENQRLLSELQRARTDLDQE 216
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 197 EDEVKRIKQENQRLLSELQRARTDLDQE 224
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 197 EDEVKRIKQENQRLLSELQRARTDLDQE 224
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 189 EDEVKRIKQENQRLLSELQRARTDLDQE 216
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 197 EDEVKRIKQENQRLLSELQRARTDLDQE 224
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 197 EDEVKRIKQENQRLLSELQRARTDLDQE 224
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 324 QDFLKRVK-ENERLLKEAKAARQDRQPE 404
+D +KR+K EN+RLL E + AR D E
Sbjct: 216 EDEVKRIKQENQRLLSELQRARTDLDQE 243
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 240 DCQQAVRGRIIPKRINIRVEH--VKHSKCRQDF-LKRVKENERLLKEAKAARQDRQPEET 410
D ++ +RG + + + + E ++ + RQD+ +K + E +R KA ++ PEE
Sbjct: 231 DLKERIRG-LHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGLDPEEA 289
Query: 411 ASS 419
ASS
Sbjct: 290 ASS 292
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 240 DCQQAVRGRIIPKRINIRVEH--VKHSKCRQDF-LKRVKENERLLKEAKAARQDRQPEET 410
D ++ +RG + + + + E ++ + RQD+ +K + E +R KA ++ PEE
Sbjct: 231 DLKERIRG-LHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGLDPEEA 289
Query: 411 ASS 419
ASS
Sbjct: 290 ASS 292
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 321 RQDF-LKRVKENERLLKEAKAARQDRQPEETASS 419
RQ++ LK + E +R + KA ++ PEE ASS
Sbjct: 164 RQEYDLKELNERQRQVARNKALKKGLDPEEAASS 197
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 321 RQDF-LKRVKENERLLKEAKAARQDRQPEETASS 419
RQ++ LK + E +R + KA ++ PEE ASS
Sbjct: 268 RQEYDLKELNERQRQVARNKALKKGLDPEEAASS 301
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +3
Query: 195 KDRSRVQRDCSCSRCDCQQAVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEA 374
++R ++R+ R ++ R ++ I +E K + + L+R ++NER+ +E
Sbjct: 363 QERMAMERNRELERIRLEEKKRENERVRQEEIAMEISKIRELERLQLERQRKNERVRQEL 422
Query: 375 KAARQDRQPEE 407
+AAR+ + EE
Sbjct: 423 EAARKYKLQEE 433
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 177 TQSIPWKDRSRVQRDCSCSRCDCQQAVR-GRIIPKRINIRVEHVKHSKCRQDFLKRVKEN 353
+ IPWK+ V D + R + ++ P ++ R++ VKH+ K+N
Sbjct: 177 SDEIPWKNYENVLYDAAYIRMLHNDTLDFEKLCPAELSGRIQEVKHAFDEDGVRNSEKKN 236
Query: 354 ERL 362
E+L
Sbjct: 237 EKL 239
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 356 LILFDSLKEVLSALGVL 306
LILFD+LK VL ++GVL
Sbjct: 200 LILFDALKNVLQSVGVL 216
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 356 LILFDSLKEVLSALGVL 306
LILFD+LK VL ++GVL
Sbjct: 200 LILFDALKNVLQSVGVL 216
>U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical
protein C37A2.8a protein.
Length = 336
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 172 MPHKVYHGKTGRVYNVTAHALGVIVNKRFAEGLYRSASISVLSMSSTPSADKTSLRESKR 351
+P +H + RVY + L + NKR + +L MS DK +E+++
Sbjct: 189 IPEHYHHSEEQRVYGTSHMRLSLNENKR------KEEIEKLLEMSKKTDMDKAKKKETEK 242
Query: 352 MRGY*RKPRLH 384
R R+ +L+
Sbjct: 243 HRDILRREKLN 253
>Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical
protein C17H1.13 protein.
Length = 293
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 240 DCQQAVRGRIIPKRINIRVEHVKH 311
D +AVR I+ ++ N V+HVKH
Sbjct: 116 DLAKAVRNDILEEKYNSTVQHVKH 139
>AF273829-1|AAG15178.1| 372|Caenorhabditis elegans nuclear receptor
NHR-87 protein.
Length = 372
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 225 SSHVVHATCLSMVYFVWHTLLKCTI-AYDVYNVSNFVHFHVRGERNSSMCAE 73
++ V+ TC VW+T+LK I ++ + +S + F E S C E
Sbjct: 250 AAKVMKGTCTGCRRKVWNTMLKDNIDQFEFFALSALILFQTGLEGQSESCME 301
>AF003384-2|AAL08040.1| 428|Caenorhabditis elegans
Acyltransferase-like protein 14,isoform b protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 156 TIAYDVYNVSNFVHFHVRGERNSSMCAEPASEQVP 52
T YDVY + V + R ER MC ++ VP
Sbjct: 99 TAGYDVYEYGDDVTTYYRDERVLMMCNHQSTADVP 133
>AF003384-1|AAK71374.2| 415|Caenorhabditis elegans
Acyltransferase-like protein 14,isoform a protein.
Length = 415
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 156 TIAYDVYNVSNFVHFHVRGERNSSMCAEPASEQVP 52
T YDVY + V + R ER MC ++ VP
Sbjct: 97 TAGYDVYEYGDDVTTYYRDERVLMMCNHQSTADVP 131
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 336 KRVKENERLLKEAKAARQDR-QPEETASSP*SCPHRQWN 449
KR ++NE LLK+A D Q ETA S + P WN
Sbjct: 38 KRPRKNEDLLKDAPETSDDEDQRAETAGSR-NYPANLWN 75
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 336 KRVKENERLLKEAKAARQDR-QPEETASSP*SCPHRQWN 449
KR ++NE LLK+A D Q ETA S + P WN
Sbjct: 38 KRPRKNEDLLKDAPETSDDEDQRAETAGSR-NYPANLWN 75
>AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical
protein Y67D8A.3 protein.
Length = 254
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 129 RHCRHHRQWCISKGYATQSIPWKDRSRVQRDCSCSRCDCQQAVRGRIIPKRINIR 293
R C H + I KG+A P+KD CSC C ++R + +R R
Sbjct: 32 RKCEGHGTYAILKGHAGVC-PYKD-------CSCGTCASVMSMRANALIRRFRHR 78
>AC024776-16|AAL32242.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 87 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 225 SSHVVHATCLSMVYFVWHTLLKCTI-AYDVYNVSNFVHFHVRGERNSSMCAE 73
++ V+ TC VW+T+LK I ++ + +S + F E S C E
Sbjct: 241 AAKVMKGTCTGCRRKVWNTMLKDNIDQFEFFALSALILFQTGLEGQSESCME 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,419,442
Number of Sequences: 27780
Number of extensions: 263970
Number of successful extensions: 903
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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