Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0758
(476 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 44 6e-05
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 40 0.001
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 39 0.002
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 39 0.002
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 39 0.002
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 37 0.007
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.010
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.013
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 35 0.030
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.030
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.030
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.039
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.12
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 33 0.12
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.49
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.64
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.85
SB_20856| Best HMM Match : Transposase_11 (HMM E-Value=2.3) 30 0.85
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 1.5
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 29 2.0
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 29 2.6
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 28 3.4
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 28 4.5
SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Frame = -3
Query: 435 VLNSNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASV 262
VL+ ++ +G AG I GDSGGPL G L GV+S+VAR C + SV+A V
Sbjct: 128 VLDKSMVCAGGAGSSICHGDSGGPLQCEENGHWVLRGVASWVARMHCPGEYYSVYARV 185
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 44.0 bits (99), Expect = 6e-05
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -3
Query: 474 ISLETCRGYYGNVV-LNSNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDG 298
++ TCR G V NS IC G AG GDSGGPL + L GV+S+V +
Sbjct: 440 VNYTTCRSTNGATVDENSMICAGG-AGSSACNGDSGGPLQCLENERWVLRGVASWVTAET 498
Query: 297 CELGFPSVFASVPS 256
C SV+A V S
Sbjct: 499 CPGNTFSVYARVSS 512
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = -3
Query: 420 ICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASVPS 256
+C G AG GDSGGPL GK L GV+S+VA C + SV+A V S
Sbjct: 110 MCVGG-AGSSACNGDSGGPLVCEEGGKWVLRGVASWVATSQCPVNNYSVYARVSS 163
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 41.5 bits (93), Expect = 3e-04
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -3
Query: 471 SLETCRGYYGNVVLNSNICTSGVAG--VGIYRGDSGGPLTINHQGKEWLIGVSSFVARDG 298
S E CR YG+V +++C G GDSGGPL G +L G S+ R+
Sbjct: 587 SHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYGLRN- 645
Query: 297 CELGFPSVFASVPS 256
C +VFA V S
Sbjct: 646 CPTTHYTVFARVAS 659
Score = 30.7 bits (66), Expect = 0.64
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 381 GDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASVPS 256
GDSGGPL G +L G S+ R+ C +VFA V S
Sbjct: 285 GDSGGPLVCEDNGSWFLHGAVSYGLRN-CPTTHYTVFARVAS 325
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 474 ISLETCRGYYGNVV-LNSNICTSGVAGV--GIYRGDSGGPLTINHQGKEWLIGVSSFVAR 304
+ C Y N+ + + + +G+ G G +GDSGGPL +G+ L+GV+S+ +
Sbjct: 1938 VDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGGPLVCESKGRWVLMGVTSW-SY 1996
Query: 303 DGC-ELGFPSVFASV 262
+GC + G+ V+A V
Sbjct: 1997 NGCADSGYAGVYADV 2011
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 462 TCRGYYGNVVLNSNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGC-ELG 286
T G Y ++S + + V G+ +GDSGGPL + K L+GV+S+ GC
Sbjct: 374 TKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGGPLVCENNNKWTLVGVTSW--GYGCAHPD 431
Query: 285 FPSVFASV 262
+P ++A +
Sbjct: 432 YPGIYAKL 439
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -3
Query: 471 SLETCRGYYGNVVLNSNICTSGVA---GVGIYRGDSGGPLTINHQGKEWLIGVSSFVARD 301
S E C+ YG+ + + +G A G +GDSGGPL G+ L GV SF A
Sbjct: 96 SHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGA-G 154
Query: 300 GCELGFPSVFASV 262
CE+ +V+ V
Sbjct: 155 NCEVTSYTVYTKV 167
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -3
Query: 426 SNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASV 262
S +C G G G +GDSGGPL N G+ L G+ S+ +R+ C F +VF V
Sbjct: 574 SMVCAGG-PGRGGCQGDSGGPLVCNEAGRWVLRGIVSWGSRE-CSTEFYTVFTRV 626
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -3
Query: 426 SNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASV 262
S +C G G G +GDSGGPL N G+ L G+ S+ +R+ C F +VF V
Sbjct: 114 SMVCAGG-PGRGGCQGDSGGPLVCNEAGRWVLRGIVSWGSRE-CSTEFYTVFTRV 166
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 471 SLETCRGYYGNVVLNSNICTSGVAG--VGIYRGDSGGPLTINHQGKEWLIGVSSFVARDG 298
S E CR YG+V +++C G GDSGGPL G +L G S+
Sbjct: 917 SHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSY-GMKY 975
Query: 297 CELGFPSVFASVPS 256
C +VFA V S
Sbjct: 976 CPTTHYTVFARVAS 989
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = -3
Query: 405 VAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASVPS 256
V G GDSGGPL G L G S+ AR C + +VF V S
Sbjct: 668 VGAAGGCNGDSGGPLVCEQSGVWVLHGAVSYGAR-WCPTDYYTVFTRVSS 716
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -3
Query: 426 SNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFA 268
S IC G G +GDSGGP N GK L G S+ + C + +VFA
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEGGKWVLRGAVSW-GHEMCRTDYYTVFA 186
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.7 bits (81), Expect = 0.010
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICTS-GVAGVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
+S C Y N + +S +C G+ +GDSGGPL ++G+ + G +S+
Sbjct: 446 VSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEYKGRWHIEGATSW 500
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICTS-GVAGVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
+S C Y N + +S +C G+ +GDSGGPL + G+ + G +S+
Sbjct: 102 VSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEYNGRWHIEGATSW 156
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 35.1 bits (77), Expect = 0.030
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 459 CRGYYGNVVLNSNICTS-GVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCEL-G 286
C Y N + +S IC G+ +GDSGGP+ + G+ ++ G +S+ GC G
Sbjct: 57 CDSSYPNKIHDSMICAGIDKGGIDACQGDSGGPMVCENGGRFYIHGATSW--GYGCAAPG 114
Query: 285 FPSVFASV 262
V+A V
Sbjct: 115 LYGVYAKV 122
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 35.1 bits (77), Expect = 0.030
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -3
Query: 426 SNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASVPS 256
S IC G+ G+G +GDSGGP N G+ L G S+ + C +VFA V S
Sbjct: 242 SMICAGGM-GMGGCQGDSGGPFVCNEGGRWVLRGAVSW-GQPMCGTDHYTVFARVSS 296
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.1 bits (77), Expect = 0.030
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 456 RGYYGNVVLNSNICTSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCEL-GFP 280
R Y G + + + GV +GDSGGPL H + +L GV+S+ GC G
Sbjct: 789 RSYPGKISADMICAGNPEGGVDTCQGDSGGPLVCQHGNQWFLTGVTSW--GHGCAFAGKY 846
Query: 279 SVFASV 262
V+A V
Sbjct: 847 GVYAGV 852
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -3
Query: 459 CRGYYGNVVLNSNICTSGV--AGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELG 286
C+ Y V +++C G GDSGGPL G+ +L G S+ + C
Sbjct: 236 CKNKYYGVSSTAHLCAGEARSGASGGCNGDSGGPLVCEDNGRWYLHGAVSY-GKLHCPTT 294
Query: 285 FPSVFASVPS 256
+ +VFA V S
Sbjct: 295 YYTVFARVAS 304
Score = 34.3 bits (75), Expect = 0.052
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLN-SNICT--SGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
+S E C+ YG ++ S+IC + +GDSGGPL +G+ L G +SF
Sbjct: 472 VSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEEGRWVLHGATSF 528
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 414 TSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASV 262
T GVA + GDSGGPL G+ +L+G+SS+ C P VF+ V
Sbjct: 472 TEGVAKA-VCSGDSGGPLVCERGGRWFLMGLSSW--GWVCPQARPKVFSDV 519
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICTSGVAG-VGIYRGDSGGPLTINHQGKEWLIGVSSF 313
+S TC Y + S +C +G + +GDSGGP+ + GK L GV S+
Sbjct: 23 VSASTCSRAYSRLH-ESMVCAGRASGGIDSCQGDSGGPMVCEYNGKFNLEGVVSW 76
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 414 TSGVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCELGFPSVFASV 262
T GVA + GDSGGPL G+ +L+G+SS+ C P VF+ V
Sbjct: 721 TEGVAKA-VCSGDSGGPLVCERGGRWFLMGLSSW--GWVCPQARPKVFSDV 768
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICTS-GVAGVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
+S C Y + +S +C G+ +GDSGGP+ +G+ ++ G +S+
Sbjct: 851 VSRARCEKAYPGKIHDSMLCAGLDQGGIDTCQGDSGGPMVCESRGRFYIHGATSW 905
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 31.1 bits (67), Expect = 0.49
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -3
Query: 474 ISLETCRGYYGNV---VLNSNICTS-GVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVA 307
+S +TC+ Y ++ V + C G G+ +GDSGGPL +L+G S+
Sbjct: 260 VSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPLVCKEGDVWYLMGAISWGV 319
Query: 306 RDGCELG 286
GC G
Sbjct: 320 --GCARG 324
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 0.64
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 420 ICTSGVAGVGIYRGDSGGPLTINHQGKEWLI-GVSSFVARDGC 295
IC G +G GDSGGPL + H+G W++ G S+ C
Sbjct: 484 ICAGG-SGSSACSGDSGGPL-VCHEGGTWVLRGAVSWGTSHSC 524
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 30.3 bits (65), Expect = 0.85
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICTSGVAGV-GIYRGDSGGPLTINHQGKEW-LIGVSSFVARD 301
+S C+ + N + C V G +GDSG P+ + W +G+SS+ +
Sbjct: 883 VSHRVCQVNHTNAITKRMRCAGDVMGERDACKGDSGSPIVVKRTDGSWSAVGLSSW--GE 940
Query: 300 GC-ELGFPSVFASVPSS 253
GC + G V+A + S+
Sbjct: 941 GCAQKGKFGVYADLLSA 957
>SB_20856| Best HMM Match : Transposase_11 (HMM E-Value=2.3)
Length = 449
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 272 KTDGKPNSQPSLATNELTP--MSHSFPWWLIVN 364
+ +PNS SLA N TP MS FP W ++N
Sbjct: 45 RRSSRPNSAQSLAFNNATPLDMSAIFPGWRMLN 77
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 447 YGNVVLNSNICTSG-VAGVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
YG V+ +C G G + DSGGPL + G ++ G+ S+
Sbjct: 203 YGGVIHERALCAGPREGGCGPCQFDSGGPLACSEGGLWYMYGIVSY 248
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 474 ISLETC-RGYYGNVVLNSNICTS-GVAGVGIYRGDSGGPLTINHQGKEW-LIGVSSF 313
+S C G Y + S +C GV +GDSGGPL W L GV+S+
Sbjct: 182 VSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVCEDTNGRWHLEGVTSW 238
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 399 GVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
G+ +GDSGGP+ + G+ +L GV S+
Sbjct: 273 GIDSCQGDSGGPMVCENNGRFYLDGVVSW 301
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 251 PEEGTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
P ++ T P S PS + +TP + S P G P +P + TP+TP
Sbjct: 691 PSTPSMPNTPSTP-STPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTP 742
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATPLVQMLEFKTTLP 445
S PS + +TP + S P G P +P TP+TP L + P
Sbjct: 408 STPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTP 458
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 251 PEEGTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
P + T P S PS + +TP + S P G P +P + TP+TP
Sbjct: 141 PSTPSTPSTPSTP-STPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTP 192
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 251 PEEGTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATPL 412
P + T P S PS+ TP + S P I G P +P P TP+
Sbjct: 679 PSTPSTPSTPSTP-STPSMPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPI 731
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 251 PEEGTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATPL 412
P + T P S PS + TP + S P I G P +P P TP+
Sbjct: 129 PSTPSTPSTPSTP-STPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPI 181
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 399 GVGIYRGDSGGPLTINHQGKEWLIGVSSF 313
GV + DSGGPL +G+ +L GV S+
Sbjct: 167 GVDACQYDSGGPLACEERGRWYLTGVVSY 195
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -3
Query: 447 YGNVVLNSNICTS-GVAGVGIYRGDSGGPL--TINHQGKEW-LIGVSSF 313
YG+ + + +C GV +GDSGGP T ++W L+GV+S+
Sbjct: 385 YGDRITENMLCAGMRQGGVDSCQGDSGGPFVCTNPENPRQWTLVGVTSW 433
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 426 SNICTSGVAGVGIYRGDSGGPLTINHQGKEWLI 328
S IC G G G +GDSGGP GK W++
Sbjct: 200 SMICAGG-QGKGGCQGDSGGPFVCEEGGK-WVL 230
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICTSGVAGVG---IYRGDSGGPLTINH--------QGKEWLI 328
+ ++TCR + + ++ +N+ +G +GDSGGP ++++ Q + L+
Sbjct: 274 VDIQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRHVLL 333
Query: 327 GVSSFVARDGC 295
GV S+ DGC
Sbjct: 334 GVISW--GDGC 342
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = -3
Query: 474 ISLETCRGYYGN--VVLNSNICTSGVAGVGIYR--GDSGGPLTINHQGKEWLI-GVSSFV 310
+S +TC VV + IC AG I GDSGGP K W I GV S+
Sbjct: 1482 VSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGGPFVCQGSNKRWNIQGVVSWG 1541
Query: 309 ARDGCELG 286
R C G
Sbjct: 1542 TRT-CSSG 1548
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 411 SGVAGVGIYRGDSGGPLTINHQGKEWLI-GVSSFVARDGCELGFPSVFASV 262
+G G GDSGGP + +W++ GV S+ + SVFA V
Sbjct: 216 AGKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARV 266
>SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 254 EEGTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPP 373
+ GT +T P+S S + + P++H F LI GPP
Sbjct: 364 QHGTTTETSSCPSSPASTVGHGIIPLNHRF--ILIYMGPP 401
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 474 ISLETCRGYYGNVVLNSNICT-SG-VAGVGIYRGDSGGPLTINHQGKEWLIG 325
+S C+ Y V +++C SG A G GDSGG L G+ L G
Sbjct: 5 VSNAECQRKYSKVNAKAHLCACSGQAASSGGCNGDSGGALVCEEGGRSILRG 56
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 459 CRGYYGNVVLNSNICTS-GVAGVGIYRGDSGGPLTINH 349
C Y + S +C GV +GDSGGP+ H
Sbjct: 481 CMKAYRGQIHESMLCAGLDAGGVDACQGDSGGPMYTEH 518
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,500,310
Number of Sequences: 59808
Number of extensions: 298878
Number of successful extensions: 651
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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