Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0758
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 36 0.015
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 33 0.14
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 32 0.19
AL117205-4|CAB55162.1| 441|Caenorhabditis elegans Hypothetical ... 32 0.24
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 1.3
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 28 3.0
U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 9.2
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 27 9.2
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 27 9.2
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 27 9.2
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 9.2
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 9.2
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.015
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -3
Query: 450 YYGNVVLNSNICTSGVAG-VGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGC-ELGFPS 277
Y G + L S +C G + +GDSGGPL G L GV S+ GC G P
Sbjct: 215 YIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGI--GCARPGMPG 272
Query: 276 VFASVPSSGPGSNI 235
V+ +V S+ N+
Sbjct: 273 VYGNVHSASTWINL 286
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.14
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 375 SGGPLTINHQGKEWLIGVSSFVARDGCEL 289
+GGPL +N GK +IG+ + +R+ CEL
Sbjct: 236 AGGPLILNVSGKATVIGLKAPASRENCEL 264
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 471 SLETCRGYYGNVVLNSNICTSGVAGVGIYRGDSGGPLTINH--QGKEWLIGVSSF 313
+L TC +G + + CT+ + GDSGG LT + +E++I + S+
Sbjct: 242 TLATCEENWGTSIPFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSY 296
>AL117205-4|CAB55162.1| 441|Caenorhabditis elegans Hypothetical
protein Y116A8A.4 protein.
Length = 441
Score = 31.9 bits (69), Expect = 0.24
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 408 GVAGVGIYRGDSGGPLTINHQGKEWLIGVSSFVARDGCEL 289
G+ Y + GGPL N GK +IG+ + +R+ CEL
Sbjct: 225 GICTETYYTEEVGGPLVQNVSGKATVIGLKAPGSRENCEL 264
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 393 GIYRGDSGGPLTINHQGKEWL-IGVSSFVA--RDG-CELG-FPSVFASVPSSGP 247
G GDSGGPL I+ E++ IG++S+ A DG + G FP V+ + P
Sbjct: 223 GTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVP 276
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 233 VMLDPGPEEGTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATPL 412
+ + P+ GT + NS +++NE + S S V GPP + I P L
Sbjct: 437 LQVQSSPDMGTSNVYGARSNSSQCISSNENSMSSTS------VEGPPAKKKRISKPKKAL 490
Query: 413 VQMLEFKTTL 442
LE +TT+
Sbjct: 491 QSRLEKQTTI 500
>U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical
protein ZC449.7 protein.
Length = 189
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 236 MLDPGPEEGTLAKTDGKPNSQPSLATNELTPMSHSFP 346
ML P T+ D +P SQ + +TN TP++ + P
Sbjct: 7 MLSPLNTNNTVYSDDVRPRSQETTSTNFQTPLTITIP 43
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
S P A T S S P ++ +G P S IP+ +TP
Sbjct: 1694 SSPVTANGHTTESSTSAPIGVLSSGEPTSSNSIPSSSTP 1732
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
S P A T S S P ++ +G P S IP+ +TP
Sbjct: 48 SSPVTANGHTTESSTSAPIGVLSSGEPTSSNSIPSSSTP 86
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
S P A T S S P ++ +G P S IP+ +TP
Sbjct: 129 SSPVTANGHTTESSTSAPIGVLSSGEPTSSNSIPSSSTP 167
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
S P A T S S P ++ +G P S IP+ +TP
Sbjct: 134 SSPVTANGHTTESSTSAPIGVLSSGEPTSSNSIPSSSTP 172
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
S P A T S S P ++ +G P S IP+ +TP
Sbjct: 1694 SSPVTANGHTTESSTSAPIGVLSSGEPTSSNSIPSSSTP 1732
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 293 SQPSLATNELTPMSHSFPWWLIVNGPPESPR*IPTPATP 409
S P A T S S P ++ +G P S IP+ +TP
Sbjct: 1694 SSPVTANGHTTESSTSAPIGVLSSGEPTSSNSIPSSSTP 1732
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,777,334
Number of Sequences: 27780
Number of extensions: 225489
Number of successful extensions: 468
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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