Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0757
         (472 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96UQ8 Cluster: Superoxide dismutase; n=1; Rhodotorula ...    38   0.15 
UniRef50_Q652F5 Cluster: Putative uncharacterized protein P0624H...    32   5.5  
UniRef50_Q0UQS4 Cluster: Putative uncharacterized protein; n=1; ...    32   5.5  
UniRef50_UPI00015B63E8 Cluster: PREDICTED: hypothetical protein;...    31   9.7  
UniRef50_Q8EF92 Cluster: Hydrogenase accessory protein HypB; n=6...    31   9.7  
UniRef50_Q2LYL1 Cluster: GA20157-PA; n=2; pseudoobscura subgroup...    31   9.7  
UniRef50_A2F3J5 Cluster: Putative uncharacterized protein; n=1; ...    31   9.7  
UniRef50_A2EJE9 Cluster: Putative uncharacterized protein; n=1; ...    31   9.7  

>UniRef50_Q96UQ8 Cluster: Superoxide dismutase; n=1; Rhodotorula
           glutinis|Rep: Superoxide dismutase - Rhodotorula
           glutinis (Yeast)
          Length = 191

 Score = 37.5 bits (83), Expect = 0.15
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 132 RSRRFCHRYANVFYRTSRGCTSILRCISSSEERARVTFAVLLPPPAW-CRKTVTEVTAKM 308
           R RR C RY  ++   +RG T   R +  S  +    F+   PP AW C  T+T  T + 
Sbjct: 122 RQRR-CPRYPGIWMGLARGTTRRPRTLRLSRPQPGTRFSATFPPSAWTCGSTLTTSTTRS 180

Query: 309 Q 311
           Q
Sbjct: 181 Q 181


>UniRef50_Q652F5 Cluster: Putative uncharacterized protein
           P0624H09.24; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0624H09.24 - Oryza sativa subsp. japonica (Rice)
          Length = 264

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 370 SFPTNFLFLKLQSLDGDNSHCILAVTSV-TVLRHQAGGGSNTAKVTLAL 227
           S PT  L ++  S DGD++ C   V       RH+AGGG    +V  A+
Sbjct: 100 STPTELLRMRRDSGDGDSAACAAEVDEAGEANRHEAGGGPAVTRVLGAM 148


>UniRef50_Q0UQS4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 505

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = +3

Query: 117 SPGHKRSRRFCHRYANVFYRTSRGCTSILRCISSSEERARVTFAVLLPPPAWCRKTVTEV 296
           +P H R   FCH  A+ +YR   G T    C     +     F  +L PP W R+   E 
Sbjct: 15  TPAH-RDMMFCHECADEWYRDEHGLT----CPECGSD-----FTEILAPPGWTRRRHIEP 64

Query: 297 TAKMQCE 317
              +Q E
Sbjct: 65  ANAVQIE 71


>UniRef50_UPI00015B63E8 Cluster: PREDICTED: hypothetical protein; n=1;
            Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
            - Nasonia vitripennis
          Length = 1379

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 120  PGHKRS--RRFCHRYANVFYRTSRGCTSILRCISSSEERARVTFAVLLPPPAWCRKTVTE 293
            PG  R+  R F H+ +++F  + RG  +   CI        +  AV+  P +W R+T+ E
Sbjct: 867  PGRARAILRGFTHQASDIFSESIRGRQTAANCIIG------LAMAVIKNPTSWTRRTLDE 920

Query: 294  V 296
            +
Sbjct: 921  I 921


>UniRef50_Q8EF92 Cluster: Hydrogenase accessory protein HypB; n=6;
           Gammaproteobacteria|Rep: Hydrogenase accessory protein
           HypB - Shewanella oneidensis
          Length = 264

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +1

Query: 7   ACHVKITSTHSTLHHLI---PTVCIQEHNLGNIVDQLCTSLQDIKDHEDSVI 153
           ACH+     H  LHHL      +C  E N+GN+V   C +  D+  H++ V+
Sbjct: 133 ACHLDAFMVHGALHHLPLEGVDICFVE-NVGNLV---CPASYDVGTHKNIVL 180


>UniRef50_Q2LYL1 Cluster: GA20157-PA; n=2; pseudoobscura subgroup|Rep:
            GA20157-PA - Drosophila pseudoobscura (Fruit fly)
          Length = 2248

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +1

Query: 16   VKITSTHSTLHHLIPTVCIQE--HNLGNIVDQLCTSLQDIKDHEDSVIGMPTCSIEQAEA 189
            V + +TH    HL+P+    +  HNL ++V+QLC +      H+  ++      IE+ E 
Sbjct: 2131 VSLAATHP---HLLPSDIQSDIKHNLDSLVNQLCNTRLGTNQHQRLLLLRQRQLIEEDEL 2187

Query: 190  VRQYYAAFPALKKGQESPL 246
              ++Y  +   +K     L
Sbjct: 2188 RLKHYVEYEKFQKSLRQSL 2206


>UniRef50_A2F3J5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 606

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -2

Query: 219 SWKCSVILTYSLCLFYRTRWHTYDRIFVIFYVLETSTQLINNVS*IVFLN--ADCRY 55
           S KC  I   S C+FY+  +  Y     +FYV  + + +IN  S I   N   +C Y
Sbjct: 187 SKKCGAISYVSNCIFYKNYYSNY----ALFYVENSDSNVINIASSIFLANERTNCHY 239


>UniRef50_A2EJE9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 567

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +3

Query: 216 SSEERARVTFAVLLPPPAWCRKTVTEVTAKMQCELSPSKDWSLR-NKKFVGKERRNSYHG 392
           S+     V + ++   P   ++   +  A  Q E  P K  S R N +   ++R+   H 
Sbjct: 384 SNNNNNNVVYIIVNENPEQQQQEEPKPQAPKQQESKPQKSHSQRRNSRQQQEQRQQKSHS 443

Query: 393 QRRNRKRSNGHNRSFESK 446
           QRRN +    H+R  + +
Sbjct: 444 QRRNSRHQPKHHRKHQER 461


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,194,246
Number of Sequences: 1657284
Number of extensions: 8661679
Number of successful extensions: 24390
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24371
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)