Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0757
         (472 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112343-1|AAI12344.1|  508|Homo sapiens SFRS12 protein protein.       31   2.0  
BC067770-1|AAH67770.1|  508|Homo sapiens splicing factor, argini...    31   2.0  
AF459094-1|AAL67778.1|  508|Homo sapiens splicing factor, argini...    31   2.0  
BC130569-1|AAI30570.1|  749|Homo sapiens fibronectin type III an...    29   8.1  

>BC112343-1|AAI12344.1|  508|Homo sapiens SFRS12 protein protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKD 449
           R   T  T K +   SPS     RNKK   +E+   +  +RR R+RS    +S   +D
Sbjct: 391 RSPRTSKTIKRKSSRSPSP--RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRD 446


>BC067770-1|AAH67770.1|  508|Homo sapiens splicing factor,
           arginine/serine-rich 12 protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKD 449
           R   T  T K +   SPS     RNKK   +E+   +  +RR R+RS    +S   +D
Sbjct: 391 RSPRTSKTIKRKSSRSPSP--RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRD 446


>AF459094-1|AAL67778.1|  508|Homo sapiens splicing factor,
           arginine/serine-rich 12 protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKD 449
           R   T  T K +   SPS     RNKK   +E+   +  +RR R+RS    +S   +D
Sbjct: 391 RSPRTSKTIKRKSSRSPSP--RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRD 446


>BC130569-1|AAI30570.1|  749|Homo sapiens fibronectin type III and
           SPRY domain containing 2 protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
 Frame = +1

Query: 64  VCIQEHNLGNIVDQLCTSLQDIKDHE-----DSVIGMPTC-SIEQAEAVRQYYAAFPALK 225
           +C +  NL N VD     L   +  E     +SV+G+PTC S+ Q +  R Y     AL 
Sbjct: 488 ICWESGNL-NPVDSYTVELTQAESPEASGVTESVVGIPTCESVVQLQPGRSYIIYVRALN 546

Query: 226 KGQES 240
            G  S
Sbjct: 547 MGGPS 551


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,850,769
Number of Sequences: 237096
Number of extensions: 1450865
Number of successful extensions: 3581
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3581
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)