Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0757
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical pr... 30 0.73
U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical pr... 30 0.73
U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting... 27 5.1
U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting... 27 5.1
U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting... 27 5.1
U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting... 27 5.1
U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting... 27 5.1
U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting... 27 5.1
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 6.8
U42841-11|AAP31429.1| 394|Caenorhabditis elegans Gex interactin... 27 6.8
U42841-10|AAM97954.1| 380|Caenorhabditis elegans Gex interactin... 27 6.8
U42841-8|AAM97953.1| 476|Caenorhabditis elegans Gex interacting... 27 6.8
U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting... 27 6.8
U42841-6|AAM97956.1| 404|Caenorhabditis elegans Gex interacting... 27 6.8
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 27 6.8
AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical ... 27 9.0
>U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical
protein ZC487.1b protein.
Length = 409
Score = 30.3 bits (65), Expect = 0.73
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 181 AEAVRQYYAAFPALKKGQESPLQYYCLHLLGVVR 282
AEAVR FPA+ + PL+++C H +G +R
Sbjct: 108 AEAVRNQIGGFPAVVR----PLRHHCAHSVGFIR 137
>U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical
protein ZC487.1a protein.
Length = 411
Score = 30.3 bits (65), Expect = 0.73
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 181 AEAVRQYYAAFPALKKGQESPLQYYCLHLLGVVR 282
AEAVR FPA+ + PL+++C H +G +R
Sbjct: 108 AEAVRNQIGGFPAVVR----PLRHHCAHSVGFIR 137
>U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting
protein protein16, isoform g protein.
Length = 375
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKDS 452
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++ S
Sbjct: 70 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQGHRS 127
>U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting
protein protein16, isoform k protein.
Length = 657
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKDS 452
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++ S
Sbjct: 352 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQGHRS 409
>U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting
protein protein16, isoform c protein.
Length = 706
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKDS 452
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++ S
Sbjct: 401 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQGHRS 458
>U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting
protein protein16, isoform a protein.
Length = 663
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKDS 452
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++ S
Sbjct: 358 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQGHRS 415
>U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting
protein protein16, isoform b protein.
Length = 603
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKDS 452
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++ S
Sbjct: 298 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQGHRS 355
>U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting
protein protein16, isoform j protein.
Length = 716
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFESKDS 452
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++ S
Sbjct: 411 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQGHRS 468
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 145 NLRDLLCPGD*YTADQQC 92
+L DL PG +TADQQC
Sbjct: 459 HLSDLRLPGQRFTADQQC 476
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 145 NLRDLLCPGD*YTADQQC 92
+L DL PG +TADQQC
Sbjct: 459 HLSDLRLPGQRFTADQQC 476
>U42841-11|AAP31429.1| 394|Caenorhabditis elegans Gex interacting
protein protein16, isoform l protein.
Length = 394
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFE 440
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++
Sbjct: 28 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQ 81
>U42841-10|AAM97954.1| 380|Caenorhabditis elegans Gex interacting
protein protein16, isoform f protein.
Length = 380
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFE 440
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++
Sbjct: 28 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQ 81
>U42841-8|AAM97953.1| 476|Caenorhabditis elegans Gex interacting
protein protein16, isoform e protein.
Length = 476
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFE 440
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++
Sbjct: 124 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQ 177
>U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting
protein protein16, isoform i protein.
Length = 447
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFE 440
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++
Sbjct: 95 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQ 148
>U42841-6|AAM97956.1| 404|Caenorhabditis elegans Gex interacting
protein protein16, isoform h protein.
Length = 404
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 276 RKTVTEVTAKMQCELSPSKDWSLRNKKFVGKERRNSYHGQRRNRKRSNGHNRSFE 440
+ TVTE + + E +++ R ++ KERR+ +H R+ GH ++
Sbjct: 52 KPTVTETVQRFE-ETRRTEEVERRVQRREKKERRSRHHSSSRHHSGWEGHTGGYQ 105
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 145 NLRDLLCPGD*YTADQQC 92
+L DL PG +TADQQC
Sbjct: 459 HLSDLRLPGQRFTADQQC 476
>AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical
protein T23B12.6 protein.
Length = 670
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = -2
Query: 210 CSVILTYS--LCLFYRTRWHTY 151
CS+++ YS +C++ T W+TY
Sbjct: 217 CSIVVAYSYFVCVYRVTEWNTY 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,015,718
Number of Sequences: 27780
Number of extensions: 220833
Number of successful extensions: 679
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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