Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0755
(291 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 99 2e-20
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 86 2e-16
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 85 2e-16
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 78 4e-14
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 72 2e-12
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 58 4e-08
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 49 2e-05
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 2e-05
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 48 3e-05
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 46 1e-04
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 39 0.018
UniRef50_A7HM62 Cluster: Ste24 endopeptidase; n=1; Fervidobacter... 32 2.1
UniRef50_Q8YXH3 Cluster: Zam protein; n=6; Cyanobacteria|Rep: Za... 31 4.9
UniRef50_A4FDT7 Cluster: Transcriptional regulator; n=1; Sacchar... 31 4.9
UniRef50_Q01W69 Cluster: Putative uncharacterized protein precur... 31 6.5
UniRef50_A0RRG8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/83 (57%), Positives = 58/83 (69%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 210 KMVLPIFDEKPTINSNGPIARHL 278
KMVLPI+DE IARHL
Sbjct: 60 KMVLPIYDEDDN-QYKRTIARHL 81
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 85.8 bits (203), Expect = 2e-16
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 210 KMVLPIFDEKPTI 248
KMVLPI D + TI
Sbjct: 59 KMVLPIPDAEGTI 71
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 85.4 bits (202), Expect = 2e-16
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 210 KMVLPIFDEKPTINSNGPIARHL 278
KMVLPI D T N +AR L
Sbjct: 60 KMVLPIPDADGTA-LNRTLARSL 81
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 77.8 bits (183), Expect = 4e-14
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 210 KMVLPIFDEKPTI 248
KMVLPI D + I
Sbjct: 60 KMVLPIPDAEGNI 72
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 72.1 bits (169), Expect = 2e-12
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 210 KMVLPIFD 233
KM L I D
Sbjct: 60 KMSLAIPD 67
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 58.0 bits (134), Expect = 4e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 203
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 204 MSKMVLPIFD 233
+ K + I D
Sbjct: 60 IEKTSIAIPD 69
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Frame = +3
Query: 45 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 206
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 207 SK 212
K
Sbjct: 63 LK 64
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.2 bits (112), Expect = 2e-05
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 227
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRI 63
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 51 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 221
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 222 PI 227
I
Sbjct: 62 EI 63
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 227
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEI 68
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 75 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKMSK 212
N CIF + FD C Y CS DA + DG FICN HL K F++ K
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILK 60
>UniRef50_A7HM62 Cluster: Ste24 endopeptidase; n=1; Fervidobacterium
nodosum Rt17-B1|Rep: Ste24 endopeptidase -
Fervidobacterium nodosum Rt17-B1
Length = 406
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 170 KPSVVMIRVGRTRRLVCYARVERHDGRENAAVNSHLSRRHTHGH*RHIVAV 18
K + + +G+ RRLV Y + + E AV +H H H H ++A+
Sbjct: 237 KQNAYLTGIGKARRLVLYDNILKQTDDEILAVVAHELGHHAHRHIAKLIAI 287
>UniRef50_Q8YXH3 Cluster: Zam protein; n=6; Cyanobacteria|Rep: Zam
protein - Anabaena sp. (strain PCC 7120)
Length = 783
Score = 31.1 bits (67), Expect = 4.9
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -3
Query: 196 RLMRWLLQINHPSS*YASGEHGDLYVMHASNDTMDAKMQRLTLICRGAIPTGISAILLPL 17
RL R LQ+N PS+ + G L + ++ + + + L L+ I T +SA+ +P
Sbjct: 407 RLARGSLQLNLPSNQNPYYDEGSLGAVLVNDSPVRSLLMELVLLVNELIATHLSALGIPA 466
Query: 16 *IWTT 2
IW T
Sbjct: 467 -IWRT 470
>UniRef50_A4FDT7 Cluster: Transcriptional regulator; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep:
Transcriptional regulator - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 292
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -3
Query: 259 PFEFIVGFSSKMGKTIFDILKRLMRWLLQINHPSS*YASGEHGDLYVMHASNDTMDAKMQ 80
P F G ++ + + +R WLL++N P+ A GE L H N+T A +
Sbjct: 152 PGPFAAGERRRLAERRVALSQRKPEWLLRLNRPAD--AIGELSALTAAHPHNETFAALLM 209
Query: 79 R 77
R
Sbjct: 210 R 210
>UniRef50_Q01W69 Cluster: Putative uncharacterized protein
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Putative uncharacterized protein precursor - Solibacter
usitatus (strain Ellin6076)
Length = 693
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAY 152
MAL+P PR+ R+ R + +VSF C P D Y
Sbjct: 217 MALLPEAGIPRRSRILRTLQVGLVSFALCAFQLLPIFADGY 257
>UniRef50_A0RRG8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: Putative
uncharacterized protein - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 451
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 75 NRCIFASIVSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKMSKM 215
N C + + ++ ITYK+P S YH D ICN H+I + + +K+
Sbjct: 59 NICFNDAHMVYNGKITYKTPYS--FYHKKLDNKIICNKHMISKEESNKL 105
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,118,079
Number of Sequences: 1657284
Number of extensions: 5296743
Number of successful extensions: 12961
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12955
length of database: 575,637,011
effective HSP length: 74
effective length of database: 452,997,995
effective search space used: 9965955890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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