Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0755
         (291 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.22 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   1.5  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   2.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   2.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   2.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   4.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   4.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   6.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    19   8.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   8.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    19   8.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    19   8.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           19   8.2  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    19   8.2  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.22
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 159 DGWFICNSHLIKRFKMSKMVLPIFDEKPT-INSNGPIARH 275
           D +F C+ H  K +    ++  ++   PT   +N P  RH
Sbjct: 343 DDYFFCSPHPHKVYDFELLIKGVYQVNPTKTRTNLPTHRH 382


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 96  IVSFDACITYKSPCSPD 146
           ++++  C+  K PCSP+
Sbjct: 53  LLNYINCLLEKGPCSPE 69


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 114 CITYKSPCSPD 146
           C+  K PC+PD
Sbjct: 48  CLLEKKPCTPD 58


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
 Frame = +3

Query: 48  GMAPRQMRVNRCIFASIVSFDA----CITYKS-PCSPDAYHDDGWFICNSHL 188
           G+   Q  VNRC   S   FD     C T  S P  P      G  +  SHL
Sbjct: 5   GLGAIQPGVNRCKLLSCKDFDTLYRDCTTASSWPGRPPKRAPVGLSLAASHL 56


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 63  VAAPYPRALAPYCCRYKY 10
           VAA +PR   P  C+Y Y
Sbjct: 179 VAATHPRYADPDDCQYFY 196


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 105 FDACITYKSPCSP 143
           + AC+  K PC P
Sbjct: 43  YAACLLSKGPCPP 55


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -2

Query: 182 AVADKPSVVMIRVGRTRRLVCYARVERHDGRENAAVNSHLS 60
           ++ DKP+ +  ++      + Y   E +   E   +N+HLS
Sbjct: 22  SIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRYMNAHLS 62


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 175  ATATSSNVLKCQKWFCPFSTK 237
            A  TS +++KC     PF +K
Sbjct: 1046 AVMTSDSIMKCAFCDTPFISK 1066


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 195 RFKMSKMVLPIFDEKPTINSNGPIARHLS 281
           RF +++  L  FD   T   N    +HLS
Sbjct: 59  RFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 218 FAHFRRKTNNKFK 256
           FA+F   +NN FK
Sbjct: 95  FAYFLEVSNNNFK 107


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 195 RFKMSKMVLPIFDEKPTINSNGPIARHLS 281
           RF +++  L  FD   T   N    +HLS
Sbjct: 59  RFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 8/19 (42%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -2

Query: 170 KPSVVMIRVG-RTRRLVCY 117
           KP+V ++RVG   RR++ +
Sbjct: 153 KPTVHLVRVGTEPRRVISF 171


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 195 RFKMSKMVLPIFDEKPTINSNGPIARHLS 281
           RF +++  L  FD   T   N    +HLS
Sbjct: 59  RFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 52  IPTGISAILLPL*IW 8
           IP GI   L P+ +W
Sbjct: 64  IPDGIHTSLYPVLVW 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,884
Number of Sequences: 336
Number of extensions: 1393
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5109936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)