Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0755
         (291 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1108 + 8758486-8758815,8758913-8758960,8761512-8761664,876...    27   2.5  
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679           27   3.3  
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240...    26   4.4  
10_08_0964 + 21906737-21907993                                         26   5.8  
08_02_0199 - 14160881-14161054,14161151-14161306,14161802-141619...    26   5.8  
07_03_0460 + 18425464-18427473                                         26   5.8  
07_03_1786 - 29507906-29508898                                         25   7.7  

>01_01_1108 +
           8758486-8758815,8758913-8758960,8761512-8761664,
           8761749-8761847,8761884-8761991,8762078-8762200,
           8763030-8763287
          Length = 372

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 239 FFVENGQNHF*HFKTFDEVAVADKPSVVM 153
           FF + G N+  H+    EVA AD+ S+++
Sbjct: 229 FFFDLGSNNRGHYLRISEVAGADRSSIIL 257


>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
          Length = 939

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 289 YFQLKCLAIGPFEFIVGFSSKMGKTIFDI 203
           YF    + +GP +F VG   K+ K +FDI
Sbjct: 793 YFGFWRIEMGPIKFEVGAMPKLQKFLFDI 821


>07_03_1764 +
           29322683-29323387,29323809-29323889,29323968-29324072,
           29324453-29325382,29326728-29326856,29326953-29327042,
           29327237-29327293,29327362-29327394
          Length = 709

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 144 DAYHDDGWFICNSH 185
           D+YHDDG  +C+ H
Sbjct: 325 DSYHDDGASLCSKH 338


>10_08_0964 + 21906737-21907993
          Length = 418

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -3

Query: 136 HGDLYVMHASNDTM 95
           HG+L V+HA++DTM
Sbjct: 308 HGELCVLHANSDTM 321


>08_02_0199 -
           14160881-14161054,14161151-14161306,14161802-14161921,
           14162046-14162143,14162969-14163041,14164472-14164619,
           14165108-14165232,14165611-14165652,14165757-14166074,
           14166633-14167559,14167584-14167852,14167946-14168255,
           14169281-14169465,14170795-14170901,14171320-14171486
          Length = 1072

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 184 WLLQINHPSS*YA-SGEHGDLYVMHASNDTMD 92
           WL++ N     +A SGEH ++   H+  DT+D
Sbjct: 220 WLMEANFLEDQFAKSGEHQNIVKAHSVIDTVD 251


>07_03_0460 + 18425464-18427473
          Length = 669

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 215 GFAHFRRKTNNKFKWTN 265
           GFAH++ +TNNK+   N
Sbjct: 13  GFAHYKVQTNNKYSALN 29


>07_03_1786 - 29507906-29508898
          Length = 330

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 191 DEVAVADKPSVVMIRVGRTRRLVCYARVERHDGRENAAVNSHLSR 57
           D VA+   PSV M    R  R   Y  VE++    N +V++ LSR
Sbjct: 134 DGVAMLGGPSVAMRTGRRDSRESYYGVVEQYIPNHNDSVSTVLSR 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,537,992
Number of Sequences: 37544
Number of extensions: 151493
Number of successful extensions: 340
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 316296968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)