Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0755
(291 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50700| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.37
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 1.1
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 1.1
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 1.1
SB_44066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.5
SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7) 27 2.6
SB_15787| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_36306| Best HMM Match : VQ (HMM E-Value=6.9) 27 3.5
SB_19101| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_46033| Best HMM Match : Phage_integrase (HMM E-Value=0.022) 26 6.1
SB_10345| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 26 6.1
SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_12086| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.2e-07) 26 6.1
SB_12346| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
>SB_50700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 29.9 bits (64), Expect = 0.37
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 121 HTSRRVRPTRIMT----TDGLSATATSSNVLKCQKWFCPFSTKNQQ*IQ 255
H + + P R+M DGLS ++ +SN +KC +ST+ Q+ IQ
Sbjct: 36 HYACKGSPFRVMQWNVLADGLSGSSPTSNFIKCPSEALSWSTRKQRLIQ 84
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 121 HTSRRVRPTRIMTTDGLSATATSSNVLKCQKWFCPFSTK 237
HT R+ +P + + + A ATS++++ C C FSTK
Sbjct: 408 HTQRQRKPRKGSLAEEI-AKATSTHIVVCTDENCQFSTK 445
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 121 HTSRRVRPTRIMTTDGLSATATSSNVLKCQKWFCPFSTK 237
HT R+ +P + + + A ATS++++ C C FSTK
Sbjct: 260 HTQRQRKPRKGSLAEEI-AKATSTHIVVCTDENCQFSTK 297
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 121 HTSRRVRPTRIMTTDGLSATATSSNVLKCQKWFCPFSTK 237
HT R+ +P + + + A ATS++++ C C FSTK
Sbjct: 408 HTQRQRKPRKGSLAEEI-AKATSTHIVVCTDENCQFSTK 445
>SB_44066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 140 RTRRLVCYARVERHDGRENAAVNSHLSRRHTHG 42
R R + ++RV+ H G + + H +HT G
Sbjct: 71 RDRTMTYHSRVKHHQGTRDRTITYHSRGKHTQG 103
>SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)
Length = 534
Score = 27.1 bits (57), Expect = 2.6
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -3
Query: 256 FEFIVGFSSKMGKTIFDILKRLMRWLLQINHPSS*YASGEHGDLYV---MHASNDTMDA- 89
FE++ GFS+K T + R + L H S SG + H + DT+
Sbjct: 324 FEYVSGFSNKTLSTSSPVSVRWSKHELTTPHKSILPCSGSFSISFAAPECHKTTDTIKVY 383
Query: 88 -KMQRLTLICRGAIPTGISAILLP 20
++ R + R A+P G +A+ LP
Sbjct: 384 EQLSRKYITERPALP-GQTAVFLP 406
>SB_15787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 223 GKTIFDILKRLMRWLLQINHPSS*YASGEHGDLYVMHASNDTMDA 89
G +F +++ L+R ++ N + ASG HG + + ASN + A
Sbjct: 300 GVYLFFVMEYLLRMYVRFNDNAETGASGGHGHSHQILASNILLQA 344
>SB_36306| Best HMM Match : VQ (HMM E-Value=6.9)
Length = 109
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 134 RRLVCYARVERHDGRENAAVNSHLSRRHTHG 42
R + ++RV+ H G + + H +H HG
Sbjct: 16 RTMTYHSRVKHHQGTRDRTMTYHFRGKHHHG 46
>SB_19101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -2
Query: 227 NGQNHF*HFKTFDEVAVADKPSVVMIRVGRTRRLVCYARVERHDGRENAA-VNSHLSRRH 51
NG H + + + + + SV R L +AR ++ GRE A VN+H+
Sbjct: 10 NGSRHKPNTRQHYTIELGTERSVAQGACNRQITLDRHARQVKY-GREGAKDVNAHVQLEK 68
Query: 50 THGH 39
HGH
Sbjct: 69 AHGH 72
>SB_46033| Best HMM Match : Phage_integrase (HMM E-Value=0.022)
Length = 645
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -3
Query: 265 IGPFEFIVGFSSKMGKTIFDILKRLMRWLLQINHPSS*YASGEHGDLYVMHASNDTMDAK 86
+ F + F + IF+ + ++ W+L NH Y + V A++ A
Sbjct: 143 VDDFYLTLAFGLRSAPYIFNCVANMVEWILINNHNVVHYLD---DFILVGPANSQYCAAA 199
Query: 85 MQRLTLICRGAIP 47
+ R ++C+ +P
Sbjct: 200 LSRCRVVCQSLVP 212
>SB_10345| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 474
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 176 QQPPHQTF*NVKNGFAHFRRKTNNKFKWT 262
Q+ HQ F + NGF + N+K WT
Sbjct: 343 QRKGHQGFCDFNNGFCLWENDINDKGDWT 371
>SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +3
Query: 135 CSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEKPTI 248
C+P GW+ C + ++ L +F E PT+
Sbjct: 178 CNPRFLQSTGWYTCGAENVRNRTRDTKYLNVF-ESPTV 214
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 141 PDAYHDDGWFICNSHLIKRFKMSKMV 218
P+ +HD+ F+C S R K K +
Sbjct: 869 PEGFHDNDVFVCESRYTNRNKSFKKI 894
>SB_12086| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.2e-07)
Length = 524
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 146 VGRTRRLVCYARVERHDGRENAAVNSHLSRRH 51
+ R RR YAR E++DG L+RRH
Sbjct: 10 IQRFRRPTRYARCEQNDGMVAVPETFSLNRRH 41
>SB_12346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 94 PSCRSTRA*HTSRRVRPTRIMTTDGLSATATSSNVLKCQK 213
P S + S R+ P + TTDG SAT N +C+K
Sbjct: 154 PPITSRHSREPSTRLAPRGVATTDGDSAT---RNATQCRK 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,812,330
Number of Sequences: 59808
Number of extensions: 177100
Number of successful extensions: 451
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 328507322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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