Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0755
         (291 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003434-1|AAO39437.1|  982|Drosophila melanogaster SD07269p pro...    27   3.9  
AE014134-3343|AAF53964.2|  981|Drosophila melanogaster CG9252-PA...    27   3.9  
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro...    27   5.1  
AY069493-1|AAL39638.1| 1256|Drosophila melanogaster LD22119p pro...    27   5.1  
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P...    27   5.1  
AE014134-2324|AAF53278.2| 1256|Drosophila melanogaster CG31729-P...    27   5.1  
AY119226-1|AAM51086.1|  359|Drosophila melanogaster SD16985p pro...    26   6.8  
AE014134-2682|AAF53507.1|  359|Drosophila melanogaster CG4930-PA...    26   6.8  
AY075461-1|AAL68274.1|  872|Drosophila melanogaster RE16656p pro...    26   9.0  

>BT003434-1|AAO39437.1|  982|Drosophila melanogaster SD07269p
           protein.
          Length = 982

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
 Frame = +1

Query: 49  VWRRDK*ELTAAFSRPSCRSTRA*HTSRRVRPTRIMTTDGL------SATATSSNVLKCQ 210
           +W+R     T+ FS+      R   +S + RP     TD         A A + N+ K +
Sbjct: 145 IWKRSNNHTTSIFSKAQISKRRDKLSSTKKRPDTCAPTDDSRKNREPRACAPNKNIFKTR 204

Query: 211 KWFCPFSTKN 240
           +   P  TKN
Sbjct: 205 ETNAPNLTKN 214


>AE014134-3343|AAF53964.2|  981|Drosophila melanogaster CG9252-PA
           protein.
          Length = 981

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
 Frame = +1

Query: 49  VWRRDK*ELTAAFSRPSCRSTRA*HTSRRVRPTRIMTTDGL------SATATSSNVLKCQ 210
           +W+R     T+ FS+      R   +S + RP     TD         A A + N+ K +
Sbjct: 144 IWKRSNNHTTSIFSKAQISKRRDKLSSTKKRPDTCAPTDDSRKNREPRACAPNKNIFKTR 203

Query: 211 KWFCPFSTKN 240
           +   P  TKN
Sbjct: 204 ETNAPNLTKN 213


>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
           protein.
          Length = 1019

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 194 FDEVAVADKPSVVMIRVGRTRRLVCYARVERHDGRENAAV 75
           F E+A A  P+VV  R   T++    A +++H G+   AV
Sbjct: 786 FLELATAS-PAVVCCRCSPTQKAQVVALIQKHTGKRTCAV 824


>AY069493-1|AAL39638.1| 1256|Drosophila melanogaster LD22119p protein.
          Length = 1256

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 194  FDEVAVADKPSVVMIRVGRTRRLVCYARVERHDGRENAAV 75
            F E+A A  P+VV  R   T++    A +++H G+   AV
Sbjct: 955  FLELATAS-PAVVCCRCSPTQKAQVVALIQKHTGKRTCAV 993


>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
           isoform A protein.
          Length = 1087

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 194 FDEVAVADKPSVVMIRVGRTRRLVCYARVERHDGRENAAV 75
           F E+A A  P+VV  R   T++    A +++H G+   AV
Sbjct: 786 FLELATAS-PAVVCCRCSPTQKAQVVALIQKHTGKRTCAV 824


>AE014134-2324|AAF53278.2| 1256|Drosophila melanogaster CG31729-PB,
            isoform B protein.
          Length = 1256

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 194  FDEVAVADKPSVVMIRVGRTRRLVCYARVERHDGRENAAV 75
            F E+A A  P+VV  R   T++    A +++H G+   AV
Sbjct: 955  FLELATAS-PAVVCCRCSPTQKAQVVALIQKHTGKRTCAV 993


>AY119226-1|AAM51086.1|  359|Drosophila melanogaster SD16985p
           protein.
          Length = 359

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 186 LIKRFKMSKMVLPIFDEKPTINSNGPIARHLSWK 287
           L+KRF ++K+++P    + ++      AR + WK
Sbjct: 225 LMKRFVLTKIIVPDSVHQASVKKIAAAAREIIWK 258


>AE014134-2682|AAF53507.1|  359|Drosophila melanogaster CG4930-PA
           protein.
          Length = 359

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 186 LIKRFKMSKMVLPIFDEKPTINSNGPIARHLSWK 287
           L+KRF ++K+++P    + ++      AR + WK
Sbjct: 225 LMKRFVLTKIIVPDSVHQASVKKIAAAAREIIWK 258


>AY075461-1|AAL68274.1|  872|Drosophila melanogaster RE16656p
           protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 103 RSTRA*HTSRRVRPTRIMTTDGLS 174
           RSTR  H+ RRV  T I TT   S
Sbjct: 842 RSTRRLHSRRRVSSTNITTTTSTS 865


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,109,062
Number of Sequences: 53049
Number of extensions: 255832
Number of successful extensions: 558
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)