Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0755
(291 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82260-3|CAB05131.1| 346|Caenorhabditis elegans Hypothetical pr... 29 0.73
Z81493-3|CAB04036.1| 132|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 27 2.2
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr... 26 5.2
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr... 26 5.2
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z47809-3|CAA87781.2| 322|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 25 9.1
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 25 9.1
AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical ... 25 9.1
>Z82260-3|CAB05131.1| 346|Caenorhabditis elegans Hypothetical
protein C32H11.4 protein.
Length = 346
Score = 28.7 bits (61), Expect = 0.73
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 45 VGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYH 155
+GM P + + + +FA+ S D + SP P+ Y+
Sbjct: 146 IGMQPHVLNITQDLFAADFSSDKVALFVSPADPNDYY 182
>Z81493-3|CAB04036.1| 132|Caenorhabditis elegans Hypothetical
protein F01D5.3 protein.
Length = 132
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 66 MRVNRCIFASIVSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRF 200
M + I VS AC +PC D Y D D +CN+ + K F
Sbjct: 1 MLLQSSILLLSVSLAACQISTAPCQDDPYTDCRDYAALCNNPMYKNF 47
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 27.1 bits (57), Expect = 2.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 187 SSNVLKCQKWFCP 225
++N+LK KWFCP
Sbjct: 130 ATNILKLNKWFCP 142
>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
protein T14E8.1c protein.
Length = 1018
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 141 PDAYHDDGWFICNSHLIKRFKMSKMV 218
P AYH D FI N+H + F+ V
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFV 219
>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
protein T14E8.1b protein.
Length = 1030
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 141 PDAYHDDGWFICNSHLIKRFKMSKMV 218
P AYH D FI N+H + F+ V
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFV 219
>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
protein T14E8.1a protein.
Length = 1086
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 141 PDAYHDDGWFICNSHLIKRFKMSKMV 218
P AYH D FI N+H + F+ V
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFV 219
>Z47809-3|CAA87781.2| 322|Caenorhabditis elegans Hypothetical
protein F42A8.3 protein.
Length = 322
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 143 GRTRRLVCYARVERHDGRENAAVNSHLS 60
G TRRL+ YAR+ G+ + ++S +S
Sbjct: 271 GETRRLIQYARLSDPHGQRSRLLSSGMS 298
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 25.0 bits (52), Expect = 9.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Frame = +3
Query: 21 GNNMALMPVGMAPRQMRVNRCIFASIVSFDAC-ITYKSPCSPDAYHDDGW----FICNS- 182
GN+M + V R V AS+ + D C I + P Y W F C S
Sbjct: 89 GNSMVIFVVNRFKRMRNVTNIFLASLSTADLCLIWFCVPIMFMKYMSHTWSMGRFACYSV 148
Query: 183 HLIKRF 200
H I++F
Sbjct: 149 HYIQQF 154
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 25.0 bits (52), Expect = 9.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Frame = +3
Query: 21 GNNMALMPVGMAPRQMRVNRCIFASIVSFDAC-ITYKSPCSPDAYHDDGW----FICNS- 182
GN+M + V R V AS+ + D C I + P Y W F C S
Sbjct: 89 GNSMVIFVVNRFKRMRNVTNIFLASLSTADLCLIWFCVPIMFMKYMSHTWSMGRFACYSV 148
Query: 183 HLIKRF 200
H I++F
Sbjct: 149 HYIQQF 154
>AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical
protein Y73B3A.16 protein.
Length = 277
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 173 LQQPPHQTF*NVKNGFAHFRRKTNNKFK 256
+QQP T +KNG + +RK+ + F+
Sbjct: 203 VQQPLSNTKIRIKNGNVYMKRKSKSSFE 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,190,525
Number of Sequences: 27780
Number of extensions: 130563
Number of successful extensions: 355
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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