Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0755
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   1.8  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   3.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   3.1  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   3.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   5.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   9.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   9.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   9.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -2

Query: 263 WSI*IYCWFFVENGQNHF*HFKTFDEVAVADK 168
           WS+ I CW  +  G+  + ++   D +   +K
Sbjct: 822 WSMGIVCWEVMSYGERPYWNWSNQDVIKSIEK 853


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 114 CITYKSPCSPDA 149
           C+  + PC+PDA
Sbjct: 49  CLLDQGPCTPDA 60


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 136 VRPTRIMTTDGLSATATSSNVLKCQKWFCPFS 231
           VRP  +         AT+  + K  ++F PFS
Sbjct: 339 VRPATVQYDTCCQGRATAIYIDKVSRFFFPFS 370


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 114 CITYKSPCSPDA 149
           C+  + PC+PDA
Sbjct: 49  CLLDQGPCTPDA 60


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 23   QQYGANARGYGAATNE 70
            + YG NARG    T E
Sbjct: 1896 RNYGVNARGKDGMTTE 1911


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 142 PTRIMTTDGLSATATSSN 195
           PTR  TT   + TAT+++
Sbjct: 919 PTRYSTTKSSAVTATNAS 936


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -2

Query: 110 VERHDGRENAAVNSHLSRRHTHGH*RHIV 24
           V R   R+N     HL   H H    H +
Sbjct: 261 VRRDSRRKNYGGVYHLDNHHVHHANHHAI 289


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 136 VRPTRIMTTDGLSATATSSNVLKCQKWFCPFSTK 237
           V   R   TDG  A    + V +   WF  ++ K
Sbjct: 411 VASDRFFITDGEKAARMQAKVNRQPVWFYYYTYK 444


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 136 VRPTRIMTTDGLSATATSSNVLKCQKWFCPFSTK 237
           V   R   TDG  A    + V +   WF  ++ K
Sbjct: 411 VASDRFFITDGEKAARMQAKVNRQPVWFYYYTYK 444


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,030
Number of Sequences: 438
Number of extensions: 1571
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)