Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0754
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.1  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.0  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 205 ICTLTIFILFYNVYIIDSLKEFLPASYVKVKGIEKKVFRE 86
           +C  TIF++F++V     +K F  +  +    I K +  E
Sbjct: 156 VCNTTIFLIFHSVL---PIKRFFTSLGIAFDNIMKNLICE 192


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 138 RNSFKLSII*TL*NKIKIVSVQIGAREKYETSTL*YIVFYFSSLNQISLATGNAVY 305
           R+S KLS I    N + +V+ +    +  + S++   +  + S    S  TGNA+Y
Sbjct: 50  RDSVKLSKIPNNVNLMDVVAREFDKIQVGDVSSVLKFIRKYGSHFIESYVTGNALY 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,035
Number of Sequences: 336
Number of extensions: 2082
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)