Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0753
         (615 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5AFH7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_UPI0000EBE277 Cluster: PREDICTED: hypothetical protein;...    34   3.1  
UniRef50_Q4YXP7 Cluster: Cullin-like protein, putative; n=3; Pla...    34   3.1  
UniRef50_A4CWE0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q6Z469 Cluster: Putative uncharacterized protein P0430F...    32   9.4  
UniRef50_A2FZ76 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_A5AFH7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 856

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 288 TTVTHFSPPDFVSTSSYPLCPFSPLSPRCFIPTTVIGQ-TM*IATGQSKNGIN 133
           T VT  + PD  +T ++     SP++P  F+ +TV    T   AT QS NGI+
Sbjct: 112 TVVTDVASPDTTTTVAHAAVTVSPVAPATFLVSTVADSLTAVDATAQSLNGIS 164


>UniRef50_UPI0000EBE277 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 482

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 187 CSRDKAPRGKRRKWAQWVRGGGDEVRRGKMSNSGCFIVSTYQ 312
           C+  +  R  R  W QW RGGG++ R  ++       +S+YQ
Sbjct: 210 CATPENLRKNRPPWRQWERGGGEQARAPRVGEGNGQPLSSYQ 251


>UniRef50_Q4YXP7 Cluster: Cullin-like protein, putative; n=3;
           Plasmodium (Vinckeia)|Rep: Cullin-like protein, putative
           - Plasmodium berghei
          Length = 990

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 2   FFV*ILGNEVFSFTF*SNSFAYPRQIQIQVQYYTKYYIIFLMSKLMPFL 148
           +FV I+ NE + +    NS  YP  +++   ++ KYY  +  SK + FL
Sbjct: 732 YFVNIIFNETWDYNKLENSVIYPESVKMCNDFFLKYYKRYNKSKNITFL 780


>UniRef50_A4CWE0 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. WH 7805|Rep: Putative uncharacterized
           protein - Synechococcus sp. (strain WH7805)
          Length = 353

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +1

Query: 169 HGLTNHCS----RDKAPRGKRRKWAQWVRGGGDEVRRGKMSNSG 288
           HG  NHC+      K   G+ R WA W  G GD+VR G +  +G
Sbjct: 174 HG-RNHCTFTHPNSKTTFGQMRYWAGWY-GSGDDVRNGAICGAG 215


>UniRef50_Q6Z469 Cluster: Putative uncharacterized protein
           P0430F03.38; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0430F03.38 - Oryza sativa subsp. japonica (Rice)
          Length = 828

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 64  LSKTNPNPSTILYQVLYNISYVK--INAIFGLPCGNSHGLTNHCSRDKAPRGKRRK 225
           LSK +P   TI+      + +    +NA+FGLPC  S  L   CS+D+   GK++K
Sbjct: 160 LSKVDPKSGTIVTDFNQELPFGPNDVNAVFGLPC--SGQLIIPCSQDELD-GKKQK 212


>UniRef50_A2FZ76 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 451

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 58  IRLSKTNPNPSTILYQVLYNISYVKINAIFGLPCGNSH-GLTNHCSR 195
           +RL+K N  P ++ +  +YN SY+ I  ++ LP  N+H  L ++CS+
Sbjct: 264 LRLTKDNITPLSVAFISVYNPSYLDIFQLYFLP--NAHLNLHSYCSQ 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,336,919
Number of Sequences: 1657284
Number of extensions: 11372966
Number of successful extensions: 26596
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26590
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)