Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0753
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 190 SRDKAPRGKRRKWAQWVRGGGDEVRR 267
           SR  A RGK+RK  Q    GG+ +++
Sbjct: 548 SRANATRGKKRKRKQDPADGGNSMKK 573


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 190 SRDKAPRGKRRKWAQWVRGGGDEVRR 267
           SR  A RGK+RK  Q    GG+ +++
Sbjct: 440 SRANATRGKKRKRKQDPADGGNSMKK 465


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 578 LPRATNYDDGLWNFFYCILGLIYPGYL 498
           + ++T YD   W     +L  +YP YL
Sbjct: 1   MTKSTVYDTVSWLILLSLLLGLYPSYL 27


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 ISYVKINAIFGLPCGNSH 171
           + Y+K N   G  CG  H
Sbjct: 175 VDYMKKNKTLGAACGRIH 192


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 ISYVKINAIFGLPCGNSH 171
           + Y+K N   G  CG  H
Sbjct: 489 VDYMKKNKTLGAACGRIH 506


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 ISYVKINAIFGLPCGNSH 171
           + Y+K N   G  CG  H
Sbjct: 722 VDYMKKNKTLGAACGRIH 739


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 ISYVKINAIFGLPCGNSH 171
           + Y+K N   G  CG  H
Sbjct: 722 VDYMKKNKTLGAACGRIH 739


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,785
Number of Sequences: 336
Number of extensions: 3134
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)