Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0751
         (618 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0340 - 3734116-3734178,3734212-3734300,3734785-3734844,373...    28   6.8  

>10_01_0340 -
           3734116-3734178,3734212-3734300,3734785-3734844,
           3736188-3736245,3736507-3736893,3736942-3737615,
           3739154-3739203,3739903-3739943,3740721-3740860,
           3740903-3741183,3741405-3741613
          Length = 683

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 530 SILHASFPVPICGDEVNTSDIVQVPRASMRRFMDRLM 420
           S+LH SF  P  GD+ N  ++  +P       MD+++
Sbjct: 43  SLLHVSFGSPCLGDQRNREEMPGIPLERWSWGMDKML 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,801,451
Number of Sequences: 37544
Number of extensions: 215599
Number of successful extensions: 384
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)