Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0751
         (618 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g32120.1 68414.m03952 expressed protein contains Pfam profile...    29   1.9  
At1g29860.1 68414.m03650 WRKY family transcription factor simila...    27   10.0 

>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
           PF04819: Family of unknown function (DUF716) (Plant
           viral-response family)
          Length = 1206

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -1

Query: 207 FSKPYSELKLNYLYIKKDVWCRGTPDSNEVPYYKNMNF 94
           ++KP +  +    Y + D W R  PD N V + + + F
Sbjct: 350 YTKPVNNFRFPKFYFEDDCWVRVRPDENIVAFGRCLRF 387


>At1g29860.1 68414.m03650 WRKY family transcription factor similar
           to DNA-binding protein 2 GI:4322940 from [Nicotiana
           tabacum]
          Length = 282

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 116 GTSLLSGVPRHHTSFLMYR 172
           G SLL   PRHH  FLM +
Sbjct: 214 GGSLLHSFPRHHQDFLMMK 232


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,941,360
Number of Sequences: 28952
Number of extensions: 190029
Number of successful extensions: 358
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)