Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0750
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 37 0.012
02_03_0245 + 16802005-16802814,16802849-16803310,16804233-16804448 34 0.085
11_06_0494 + 24316007-24316365,24317307-24317706 31 0.79
01_05_0559 + 23281408-23282457,23282580-23282942,23283938-232839... 31 0.79
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901... 31 1.0
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 31 1.0
05_07_0125 + 27861368-27862282 29 2.4
02_04_0452 + 23044190-23045227 29 2.4
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 3.2
05_05_0065 - 22069798-22069890,22070878-22071160,22071240-220713... 28 5.6
05_01_0241 + 1800959-1801502,1802089-1802236,1802458-1802518 28 5.6
12_01_1078 - 11202284-11202343,11202941-11203000,11203036-112030... 28 7.4
06_03_0024 - 15563574-15563632,15563887-15563914,15564017-155642... 28 7.4
06_01_0808 + 6097751-6097913,6098298-6098731 28 7.4
01_05_0686 - 24277812-24277909,24278029-24278081,24278227-242783... 28 7.4
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816... 27 9.7
03_02_0341 - 7643426-7643973,7644340-7644505 27 9.7
01_07_0342 - 42860548-42862343,42863345-42863396,42863666-428638... 27 9.7
01_06_1435 + 37351653-37351990,37352241-37352424 27 9.7
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 348 TYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSPNKK 527
T H + P AV+ H P +AH+ + I++P ++ SVA+ H+ TS +
Sbjct: 935 TVHQHTQSYALTSDPVAVAVHHQPAVNKLAHEVQSISHPAVSHS-SVAESHASYTSYTWQ 993
Query: 528 SATVT 542
S+ T
Sbjct: 994 SSVAT 998
>02_03_0245 + 16802005-16802814,16802849-16803310,16804233-16804448
Length = 495
Score = 34.3 bits (75), Expect = 0.085
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = -3
Query: 255 AQQTNSGLEQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGRKLPQQMSSGPV 76
A+ G+EQH QG+ G QG+R ++P++H H + R P+ + PV
Sbjct: 416 AEGRGGGIEQH---QGKLGVDQGKRPAPEKPRQHWPHVDQLAPLADGSRSTPESRVADPV 472
Query: 75 PPGDQLGTTPQMRTVLLIWKT 13
P + + ++ L W T
Sbjct: 473 PITETSPRHSRRASLSLKWTT 493
>11_06_0494 + 24316007-24316365,24317307-24317706
Length = 252
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 525 SCWDLFRRSDRQLLSSCTRIWGRQSPQLDE 436
SCWDL D QLL+ C RI + P +E
Sbjct: 212 SCWDLCVDDDAQLLAKCARIRTLKLPPSEE 241
>01_05_0559 +
23281408-23282457,23282580-23282942,23283938-23283991,
23284088-23284156
Length = 511
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 468 YEYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
Y YN+ + E P SAT T A ST +T S ++ + TT +++S+T
Sbjct: 340 YSYNFITGEPPVQEVRPPVASATATIAAAAVSSTAVTLSSTTFTSSSISTTTISIASST 398
>10_08_0132 +
15087274-15087797,15089544-15089732,15090048-15090186,
15090454-15090594,15091420-15091569,15091908-15092011,
15092258-15092432,15092714-15092823,15092906-15093073,
15093180-15093345,15093771-15094049,15094445-15094543,
15094619-15094676,15095145-15095336,15095693-15095724,
15096023-15096117,15096321-15096426
Length = 908
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = -3
Query: 243 NSGLEQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGRKLPQQMSSGPVPPGD 64
+SG+ +LQG GKPQ QRG+ + H G R G + P ++ S P P
Sbjct: 274 HSGVASGYSLQG--GKPQQQRGEFGRLRFLPRHAGVARRRRRRGGRSPFRLVS-PSHPPP 330
Query: 63 QLGTTPQMRTVLL 25
T P M T+ L
Sbjct: 331 LSKTEPMMDTLEL 343
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 549 RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
RA PS++++AP+ P S P +++S+ SST
Sbjct: 95 RAAAPSSRISAPTSPSSAPSSPSSSSSSSST 125
>05_07_0125 + 27861368-27862282
Length = 304
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 581 SRQLRGRSMSPSLRHRRG 528
SR+ GRS SPS RHRRG
Sbjct: 189 SRRSHGRSRSPSPRHRRG 206
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +3
Query: 393 AAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTK 572
AA + H P+ ++ H + P + + H+G + S + + RAH PST+
Sbjct: 142 AAAASHQQPLNTLLLHNLLMSSSP----HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTR 197
Query: 573 LTAPSEPLSTPLMHTTASTLSSTT 644
+ P P ++A+T +TT
Sbjct: 198 PPTSAPPPPPPAAASSATTAPATT 221
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/103 (23%), Positives = 40/103 (38%)
Frame = +3
Query: 339 TPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSP 518
+P + P +Y +P + SY + + + + YNYS TSP
Sbjct: 1691 SPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSP 1750
Query: 519 NKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
+ + PS T+PS ++P T+S S T+P
Sbjct: 1751 SYSPTS--------PSYSPTSPSYSPTSPSYSPTSSAYSPTSP 1785
>05_05_0065 -
22069798-22069890,22070878-22071160,22071240-22071335,
22071456-22071558,22071633-22071693,22071816-22071887,
22072315-22072383,22072459-22072482,22073278-22073316,
22073862-22073951,22074063-22074095
Length = 320
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 231 EQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRH 130
E H L G HG P +R + Q RH+E H
Sbjct: 275 EFHKLLNGNHGDPTDRRQRAQMNGRHDEDINHAH 308
>05_01_0241 + 1800959-1801502,1802089-1802236,1802458-1802518
Length = 250
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 393 AAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTK 572
+AVS+H +P + + AH + I+ Y+ N S + ++ K + T ++ H+ + K
Sbjct: 189 SAVSFHGSPESSVRAH-SSLISIRFYKNNNSNSRSREAISAAPKNAETPSRLEIHSKARK 247
Query: 573 LT 578
+T
Sbjct: 248 IT 249
>12_01_1078 -
11202284-11202343,11202941-11203000,11203036-11203050,
11203322-11204026
Length = 279
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 262 FPEHHPS*SAPDYQLRCSRSQVSRRLHPS 348
FP HHPS + +RC+ S L PS
Sbjct: 26 FPPHHPSPARGSIGVRCAHSPSPHPLRPS 54
>06_03_0024 -
15563574-15563632,15563887-15563914,15564017-15564202,
15564283-15564332,15564435-15564691,15564772-15564910,
15565627-15565716,15567354-15567663
Length = 372
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 420 VAKIVAHQA-EEIAYPKYEYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTKL-TAPSEP 593
+A HQ+ EE P + H+ P ++ + TPS + AP EP
Sbjct: 172 IASSGIHQSFEEPDQPVHRTETPALGYHAEPDEPIHRTEAPALSQPETPSLRHHEAPEEP 231
Query: 594 LSTPLMHTTASTLSSTTP 647
L PL+ T T+ S P
Sbjct: 232 LLQPLLATNIDTVFSGFP 249
>06_01_0808 + 6097751-6097913,6098298-6098731
Length = 198
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 561 PSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
PST T PS +TP T+S L+ TTP
Sbjct: 132 PSTTPTTPSTTPATPASPGTSSGLTPTTP 160
>01_05_0686 -
24277812-24277909,24278029-24278081,24278227-24278309,
24278353-24278401,24278466-24278514,24279455-24280418
Length = 431
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 639 WTTALKPLCASAVYSTVLMEPSASWKEYEPFTASPS--RTSCWDLFRRSDRQ 490
W P+C ++ VL+ S+ K PF S ++C+D +R++ ++
Sbjct: 51 WEDVRCPVCMDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRKASKE 102
>05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,
8165938-8166012,8166674-8166846,8168697-8168795,
8169002-8169161,8169321-8169464,8169551-8169723,
8169796-8169991,8170061-8170258,8170864-8171016,
8171838-8171959,8172037-8172136,8172221-8172316,
8172400-8172530,8173717-8173819,8174373-8174555,
8174632-8174724,8174818-8174853,8175672-8175773,
8176310-8176472,8176557-8176678,8176994-8177158,
8177667-8177849,8178679-8178831,8179136-8179288,
8179373-8179444,8179530-8179664,8179739-8179800,
8179999-8180096,8180628-8180737,8180832-8181005,
8181092-8181157,8181847-8181915,8181989-8182099,
8182418-8182558,8182638-8182766,8182864-8183029,
8183174-8183388,8184883-8185089,8185501-8185572,
8185897-8186010,8186090-8186281,8186489-8186569,
8186654-8186728,8186812-8186878,8187292-8187452,
8187943-8188116,8188209-8188337,8188421-8188504,
8188589-8188650,8188728-8188800,8189008-8189142,
8189790-8189960,8190054-8190319,8190440-8190458
Length = 2448
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = -3
Query: 600 YSTVLMEPSASWKEYEPFTASPSRTSCWDL----FRRSDRQLLSSCTRIWGRQSPQLDEL 433
Y L+E +Y T WDL FRR D+QL S T SP+L E
Sbjct: 1952 YGHELLEAHECCLKYRATGEDAELTKAWDLYYHVFRRIDKQLPSLTTLDLHSVSPELLEC 2011
Query: 432 R 430
R
Sbjct: 2012 R 2012
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 453 IAYPKYEYNYSVADGHSGE-TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPL 608
I PK+++++S+ H T P+ K A VT PST + P TP+
Sbjct: 174 IVPPKHDHDHSLPPVHEPPVTVPDHKPAPVTVPDHKPPSTTTPVYAPPKPTPI 226
>01_07_0342 -
42860548-42862343,42863345-42863396,42863666-42863848,
42864288-42864461,42864528-42864962
Length = 879
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 171 QEPQRHNEHRGFRHGVRCSGRKLPQQ 94
QE Q H E R R+G RKLP++
Sbjct: 68 QEGQHHKEERDERYGFEIQVRKLPKR 93
>01_06_1435 + 37351653-37351990,37352241-37352424
Length = 173
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 213 QGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGR 109
+G GKP+G+ + P +EHR F G+ GR
Sbjct: 90 RGGGGKPRGEERRRGVPWSEDEHRLFLEGLDRYGR 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,409,956
Number of Sequences: 37544
Number of extensions: 278839
Number of successful extensions: 1178
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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