Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0750
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 35 0.057
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 30 1.2
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 30 1.2
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 30 1.2
Z66523-8|CAE17855.1| 155|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.8
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 28 5.0
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 28 5.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 5.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 6.6
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 6.6
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 6.6
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 6.6
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 6.6
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 6.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.6
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 6.6
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 28 6.6
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 8.7
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 8.7
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 456 AYPKYEYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLS 635
A P +N +V D + S + T TP+T T P+ +TP TT T +
Sbjct: 68 AIPPITFN-AVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 126
Query: 636 STTP 647
+TTP
Sbjct: 127 TTTP 130
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
T+P + T T TP+T T P+ +TP TT T ++TT
Sbjct: 93 TTPTTTTTTPTT-TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTT 136
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T+P + T T TP+T T P+ +TP TTA T ++TTP
Sbjct: 159 TTPTTTTTTPTT-TTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTP 203
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T+P + T T T +T T +E +TP TT T ++TTP
Sbjct: 123 TTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTP 168
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T+P + T T TP+T TAP+ +TP TT T ++T P
Sbjct: 173 TTPTTTTTTPTT-TTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVP 217
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T T T TP+T T P+ +TP TT T ++TTP
Sbjct: 137 TETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 182
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T+ ++ T TP+T T P+ +TP TT T ++TTP
Sbjct: 144 TTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 189
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T+P + T T P+T T P+ +TP TT T ++TTP
Sbjct: 180 TTPTTTTTTPTT-TTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTP 224
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
T+P + T T TP+T T P+ +TP TT +T +TT
Sbjct: 194 TAPTTTTTTPTT-TTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTT 237
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 465 KYEYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
KY+ N S+ + S T T + T +T T P+ +TP TT T ++TT
Sbjct: 45 KYDPNTSIISPKWVKADCTTTSTTTT---STTTTTTPTTPTTTTTTPTTTTTTPTTTTTT 101
Query: 645 P 647
P
Sbjct: 102 P 102
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
T+ ++T T TP+T T P+ +TP TT T ++ T
Sbjct: 64 TTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTET 108
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T+P + T T + T P+ +TP TT T ++TTP
Sbjct: 130 TTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 507 ETSPNKKSATVTQ*RAHTPSTKLTAP----SEPLSTPLMHTTASTLSSTT 644
ET+ + T T TP+T T P +E +TP TT +T + TT
Sbjct: 107 ETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTT 156
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Frame = +3
Query: 396 AVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSP---------NKKSATVTQ* 548
+ SYH+ + A Q + IA P + N S + HS T P + KS +
Sbjct: 292 STSYHTERSSTTTAQQPQTIALPPPQNNSSHTETHS-STGPIMMHSPGGHSMKSTEFSSS 350
Query: 549 RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
R H T T + P P+ TT + TT
Sbjct: 351 RHHKQETTTTTTTTP-QPPVFQTTTYPTTKTT 381
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Frame = +3
Query: 396 AVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSP---------NKKSATVTQ* 548
+ SYH+ + A Q + IA P + N S + HS T P + KS +
Sbjct: 626 STSYHTERSSTTTAQQPQTIALPPPQNNSSHTETHS-STGPIMMHSPGGHSMKSTEFSSS 684
Query: 549 RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
R H T T + P P+ TT + TT
Sbjct: 685 RHHKQETTTTTTTTP-QPPVFQTTTYPTTKTT 715
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Frame = +3
Query: 396 AVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSP---------NKKSATVTQ* 548
+ SYH+ + A Q + IA P + N S + HS T P + KS +
Sbjct: 876 STSYHTERSSTTTAQQPQTIALPPPQNNSSHTETHS-STGPIMMHSPGGHSMKSTEFSSS 934
Query: 549 RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
R H T T + P P+ TT + TT
Sbjct: 935 RHHKQETTTTTTTTP-QPPVFQTTTYPTTKTT 965
>Z66523-8|CAE17855.1| 155|Caenorhabditis elegans Hypothetical
protein M05D6.8 protein.
Length = 155
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 627 LKPLCASAVYSTVLMEPSASWKEYEP-FTASPSRTSCWDLFRR 502
+KPLC Y T++M A + P F P + C D F+R
Sbjct: 101 VKPLCTRNEYKTIMMRQCAKTCGFCPQFVRLPQTSRCRDSFQR 143
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
TS ++T T T T T P+ STP TT +T+ +TTP
Sbjct: 277 TSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTP---TTTTTMQTTTP 319
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -3
Query: 210 GQHGKPQGQRGKLQEPQRHNEHRGFRHGVR 121
G HG P + P RH H HG R
Sbjct: 395 GHHGPPHHHHHDGRSPSRHGHHHHHHHGCR 424
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 471 EYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHT-TASTLSSTTP 647
+Y+ SVA H+ S + SAT + PST S S+ T T S S++TP
Sbjct: 244 QYSQSVAAAHASLPSTSNGSATSPRKNDQEPSTSSGGESPSTSSAAAGTATTSAPSTSTP 303
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 471 EYNYSVADGHSGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHT-TASTLSSTTP 647
+Y+ SVA H+ S + SAT + PST S S+ T T S S++TP
Sbjct: 244 QYSQSVAAAHASLPSTSNGSATSPRKNDQEPSTSSGGESPSTSSAAAGTATTSAPSTSTP 303
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 558 TPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T S T+ +EP +T T +TLSSTTP
Sbjct: 882 TTSESTTSSTEPPTTQEESNTTTTLSSTTP 911
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 339 TPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYE----YNYSVADGHSG 506
TPV AP T P + S I A + P + +
Sbjct: 278 TPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETT 337
Query: 507 ETSPNKKSATVTQ*RAHT-PSTKLTAPSEPLSTPLMHTTASTLSSTT 644
T P S T Q T P T T P +TP+ +TT + +T+
Sbjct: 338 STEPPSSSTTPVQTTTTTAPETTRTEPPSSSTTPVQNTTTTAPETTS 384
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 339 TPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPK-----YEYNYSVADGHS 503
TPV AP T P + S I A + P + + A +
Sbjct: 462 TPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETT 521
Query: 504 GETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
SP+ + V P T T P +TP+ TT + +T+
Sbjct: 522 STESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTS 568
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
TSP+ T T + + ST +T P+ ST ++ T S+T P
Sbjct: 451 TSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +3
Query: 501 SGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTP-------LMHTTASTLSSTT 644
S E++ S+TVT PST T PS STP + T +ST SST+
Sbjct: 477 STESTSTSPSSTVTT-STTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTS 530
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
TSP+ T T + + ST +T P+ ST ++ T S+T P
Sbjct: 451 TSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +3
Query: 501 SGETSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTP-------LMHTTASTLSSTT 644
S E++ S+TVT PST T PS STP + T +ST SST+
Sbjct: 477 STESTSTSPSSTVTT-STTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTS 530
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 544 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 602
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 603 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 642
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 544 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 602
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 603 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 642
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 PVTYHAAPAPVTYHAAPAAVSYHSAPVAK--IVAHQAEEIAYPKYEYNYSVADGHSGETS 515
P+ +AP P H +P++ P++ + + P E + HS +
Sbjct: 541 PIVPLSAP-PKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSF 599
Query: 516 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSST 641
P+ + T T A T T PS P+S + T +ST +T
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTAKNT 639
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +3
Query: 339 TPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSP 518
+P + A +PV+ +P + SY +P + ++ +Y +YS TSP
Sbjct: 1597 SPTSPAAGQSPVSPSYSPTSPSY--SPTSP--SYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 519 NKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHT---TASTLSSTTP 647
+ ++ + ++PS+ +PS P +P T T+ T S T+P
Sbjct: 1653 SYSPSSPS----YSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSP 1694
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 6.6
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = +3
Query: 336 ATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEI-AYPKYEYNYSVADGHSGE- 509
A PVT + PVT + ++ + PV V + + P +
Sbjct: 554 APPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPV 613
Query: 510 --TSPNKKSATVTQ*RAHTPSTKLTAPSEP--LSTPLMHTTASTLSSTTP 647
TSP + T+ PST T+P+ P L+TP T S+T P
Sbjct: 614 VTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAP 663
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 6.6
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = +3
Query: 336 ATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEI-AYPKYEYNYSVADGHSGE- 509
A PVT + PVT + ++ + PV V + + P +
Sbjct: 610 APPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPV 669
Query: 510 --TSPNKKSATVTQ*RAHTPSTKLTAPSEP--LSTPLMHTTASTLSSTTP 647
TSP + T+ PST T+P+ P L+TP T S+T P
Sbjct: 670 VTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAP 719
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 561 PSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
P + PS STP TT +T ++TTP
Sbjct: 53 PPKSTSTPSTSTSTPTTTTTTTTTTTTTP 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +3
Query: 339 TPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSP 518
+P + A +PV+ +P + SY +P + ++ +Y +YS TSP
Sbjct: 1604 SPTSPAAGQSPVSPSYSPTSPSY--SPTSP--SYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
Query: 519 NKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHT---TASTLSSTTP 647
+ ++ + ++PS+ +PS P +P T T+ T S T+P
Sbjct: 1660 SYSPSSPS----YSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSP 1701
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Frame = +3
Query: 387 APAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGET----------SPNKKSAT 536
A V+ PV + + A P Y YS+ D + E +P + T
Sbjct: 432 ADELVAQFVEPVIRAKLTTTTKPAIPPYRRGYSIIDTTTMEPVDEITQKPTEAPTTEEPT 491
Query: 537 VTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTTP 647
T T +T P+E + P T +T +STTP
Sbjct: 492 TTTTEEPTTTTTTEEPTEAPTEPSPTTVEATEASTTP 528
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 510 TSPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
T+ T T T +T T P+ +TP TT ST + TT
Sbjct: 263 TTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETT 307
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +3
Query: 372 VTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSPNKKSATVTQ*R 551
VT AAP+ +A K + + A+P Y N A+ +TS +++ T T
Sbjct: 154 VTPTAAPSQ-PIPTATSRKAPWYIKDRTAWPTY--NRISAEKALQKTSTTQETTTST--- 207
Query: 552 AHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
P+T TA + +TPL TT + ++TT
Sbjct: 208 TAQPTTTTTATTTTTTTPLPTTTTTQPTTTT 238
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +3
Query: 372 VTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSPNKKSATVTQ*R 551
VT AAP+ +A K + + A+P Y N A+ +TS +++ T T
Sbjct: 150 VTPTAAPSQ-PIPTATSRKAPWYIKDRTAWPTY--NRISAEKALQKTSTTQETTTST--- 203
Query: 552 AHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
P+T TA + +TPL TT + ++TT
Sbjct: 204 TAQPTTTTTATTTTTTTPLPTTTTTQPTTTT 234
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +3
Query: 372 VTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGETSPNKKSATVTQ*R 551
VT AAP+ +A K + + A+P Y N A+ +TS +++ T T
Sbjct: 93 VTPTAAPSQ-PIPTATSRKAPWYIKDRTAWPTY--NRISAEKALQKTSTTQETTTST--- 146
Query: 552 AHTPSTKLTAPSEPLSTPLMHTTASTLSSTT 644
P+T TA + +TPL TT + ++TT
Sbjct: 147 TAQPTTTTTATTTTTTTPLPTTTTTQPTTTT 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,284,798
Number of Sequences: 27780
Number of extensions: 214965
Number of successful extensions: 1094
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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