Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0749
         (315 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    27   2.1  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    27   2.1  
AF125442-12|AAD12797.1|  260|Caenorhabditis elegans Hypothetical...    27   2.1  
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    26   5.0  
AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical ...    26   5.0  
U46669-6|AAM51526.1|  514|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U46669-5|AAA85746.3|  493|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical pr...    26   6.6  

>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 56   QCLPVPRTTVTRNCCCWNRN 115
            +C P+P  T    CCC N N
Sbjct: 1545 ECKPLPYDTTVTGCCCDNYN 1564


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 56   QCLPVPRTTVTRNCCCWNRN 115
            +C P+P  T    CCC N N
Sbjct: 1545 ECKPLPYDTTVTGCCCDNYN 1564


>AF125442-12|AAD12797.1|  260|Caenorhabditis elegans Hypothetical
           protein H04M03.12 protein.
          Length = 260

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 158 YVIALCIVAAVGVPVEDGKWHPYHYGDSGKYIPQT 262
           +V+ LC+V  +G    D + HP+ +  S    PQ+
Sbjct: 204 FVLFLCLVVVLGSLSPDDRTHPFAHNQSRTIPPQS 238


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 77  TTVTRNCCCWNRNYKQSALRMNSFKVHYVIALCIVAAV 190
           +T+  N   W +N K  +  + S    Y + L IVA +
Sbjct: 28  STIPENLPAWTKNTKAQSFGLKSLTALYTLILTIVAFI 65


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 264 FVCGMYLPESP*W 226
           FVC ++LPESP W
Sbjct: 205 FVCFLFLPESPRW 217


>AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical
           protein Y51A2D.4 protein.
          Length = 606

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 264 FVCGMYLPESP*W 226
           FVC M+LPE+P W
Sbjct: 202 FVCFMFLPETPRW 214


>U46669-6|AAM51526.1|  514|Caenorhabditis elegans Hypothetical
           protein C41G11.4b protein.
          Length = 514

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 107 NRNYKQSALRMNSFKVHYVIALCIVAAVGVPVEDGKWHPYHY--GDSG 244
           +R +   A R+ S+K+   +A CIV  +  P +    H Y +  GD G
Sbjct: 49  SRQHLVLAARLFSYKISLSVADCIVLFIYAPTQFAWIHSYWWFGGDIG 96


>U46669-5|AAA85746.3|  493|Caenorhabditis elegans Hypothetical
           protein C41G11.4a protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 107 NRNYKQSALRMNSFKVHYVIALCIVAAVGVPVEDGKWHPYHY--GDSG 244
           +R +   A R+ S+K+   +A CIV  +  P +    H Y +  GD G
Sbjct: 49  SRQHLVLAARLFSYKISLSVADCIVLFIYAPTQFAWIHSYWWFGGDIG 96


>U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical
           protein C41G11.4c protein.
          Length = 557

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 107 NRNYKQSALRMNSFKVHYVIALCIVAAVGVPVEDGKWHPYHY--GDSG 244
           +R +   A R+ S+K+   +A CIV  +  P +    H Y +  GD G
Sbjct: 49  SRQHLVLAARLFSYKISLSVADCIVLFIYAPTQFAWIHSYWWFGGDIG 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,819,205
Number of Sequences: 27780
Number of extensions: 155911
Number of successful extensions: 424
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)