Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0748
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 202 2e-52
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 202 2e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 202 2e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 202 2e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 202 2e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 202 2e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 202 2e-52
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 202 2e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 202 2e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 202 2e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 197 6e-51
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 133 1e-31
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 113 7e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 113 7e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 112 2e-25
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 112 2e-25
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 101 4e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 71 8e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 41 8e-04
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Score = 111 bits (266), Expect = 5e-25
Identities = 48/52 (92%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 123
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 153
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 38
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 202 bits (493), Expect = 2e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGV+HTVPIY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 197 bits (480), Expect = 6e-51
Identities = 91/119 (76%), Positives = 98/119 (82%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPK+NREKMTQIMFETFNTPAMYV L++ + DGV+HTVPIY
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIY 166
Score = 107 bits (257), Expect = 6e-24
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 133 bits (321), Expect = 1e-31
Identities = 59/120 (49%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
Frame = +1
Query: 241 GTEG-LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 414
G +G +++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 415 TEAPLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPI 594
T+APLNP NRE+ +I FETFN PA+Y+ L++ S DGV+H VPI
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPI 169
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 238
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 354
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 113 bits (273), Expect = 7e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 354
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 354
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 345
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 109 bits (261), Expect = 2e-24
Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Frame = +1
Query: 226 RDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 402
R G + L VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 403 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSH 582
+LLTE PLNP +NREKM Q+MFE + ++YVA L + + S DGV+H
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Query: 583 TVPIY 597
P+Y
Sbjct: 166 ICPVY 170
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 214
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 101 bits (242), Expect = 4e-22
Identities = 54/122 (44%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Frame = +1
Query: 256 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 432
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 433 PKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHR---YRAWT-----SRDGVSHTV 588
NRE +IMFE+FN P +Y+A LA+ R R+ T S DGV+H +
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCI 185
Query: 589 PI 594
P+
Sbjct: 186 PV 187
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 205
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 70.5 bits (165), Expect = 8e-13
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +1
Query: 310 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 489
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 490 AMYVASSRALA 522
A Y++ + L+
Sbjct: 154 AYYLSKNVVLS 164
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 205
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +1
Query: 214 PPSGRDGRYGTEGLYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 387
P S ++ + ++V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 388 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASSRALAVR 528
+ LT+ A + ++I+F+ F ++ S+ L +
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAK 134
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +1
Query: 214 PPSGRDGRYGTEGLYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 387
P S ++ + ++V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 388 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASSRALAVR 528
+ LT+ A + ++I+F+ F ++ S+ L +
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAK 134
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 202 RGKAPPSGRDGRYGTEGLYVGDEAQSKRG 288
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQG 226
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,258,435
Number of Sequences: 27780
Number of extensions: 354165
Number of successful extensions: 1315
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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