Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0748
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 202 1e-52
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 202 2e-52
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 202 2e-52
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 200 6e-52
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 199 1e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 199 1e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 198 2e-51
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 198 2e-51
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 198 2e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 177 3e-45
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 173 7e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 163 1e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 1e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 98 3e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 6e-18
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 69 2e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 57 1e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 56 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 48 5e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 36 0.027
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.4
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.4
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 28 4.1
At1g43245.1 68414.m04985 expressed protein 28 4.1
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 5.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 202 bits (493), Expect = 1e-52
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGVSHTVPIY
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 202 bits (492), Expect = 2e-52
Identities = 95/119 (79%), Positives = 98/119 (82%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGVSHTVPIY
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 202 bits (492), Expect = 2e-52
Identities = 95/119 (79%), Positives = 98/119 (82%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFNTPAMYVA L++ S DGVSHTVPIY
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 200 bits (488), Expect = 6e-52
Identities = 94/119 (78%), Positives = 98/119 (82%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFN PAMYVA L++ S DGVSHTVPIY
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 199 bits (486), Expect = 1e-51
Identities = 93/119 (78%), Positives = 97/119 (81%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFN PAMYVA L++ S DGVSHTVPIY
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 199 bits (486), Expect = 1e-51
Identities = 93/119 (78%), Positives = 97/119 (81%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
APLNPKANREKMTQIMFETFN PAMYVA L++ S DGVSHTVPIY
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 198 bits (483), Expect = 2e-51
Identities = 91/114 (79%), Positives = 97/114 (85%)
Frame = +1
Query: 256 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 435
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 436 KANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
KANREKMTQIMFETFN+PAMYVA L++ S DGVSHTVPIY
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 87.4 bits (207), Expect = 6e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 198 bits (483), Expect = 2e-51
Identities = 91/114 (79%), Positives = 97/114 (85%)
Frame = +1
Query: 256 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 435
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 436 KANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
KANREKMTQIMFETFN+PAMYVA L++ S DGVSHTVPIY
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 87.4 bits (207), Expect = 6e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 198 bits (483), Expect = 2e-51
Identities = 91/114 (79%), Positives = 97/114 (85%)
Frame = +1
Query: 256 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 435
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 436 KANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
KANREKMTQIMFETFN+PAMYVA L++ S DGVSHTVPIY
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Score = 87.4 bits (207), Expect = 6e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 177 bits (432), Expect = 3e-45
Identities = 79/114 (69%), Positives = 92/114 (80%)
Frame = +1
Query: 256 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 435
+VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNP
Sbjct: 56 FVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNP 115
Query: 436 KANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
K NREKMTQIMFE+F P+MY+ L++ S DGVSHTVPIY
Sbjct: 116 KVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIY 169
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKD 54
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 173 bits (421), Expect = 7e-44
Identities = 77/115 (66%), Positives = 93/115 (80%)
Frame = +1
Query: 253 LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 432
L+VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 433 PKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPIY 597
PKA+REKMTQIMFETF P+MY+ AL++ S DGVS+ VPIY
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIY 123
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 163 bits (395), Expect = 1e-40
Identities = 79/124 (63%), Positives = 89/124 (71%)
Frame = +1
Query: 226 RDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 405
RDG E YVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNES-YVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 406 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHT 585
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV+ L + + VSHT
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 586 VPIY 597
VP+Y
Sbjct: 154 VPVY 157
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 217
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (262), Expect = 1e-24
Identities = 47/114 (41%), Positives = 67/114 (58%)
Frame = +1
Query: 253 LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 432
+ VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLN
Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Query: 433 PKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTSRDGVSHTVPI 594
P NREKM + MFE +N +++ L + + S DGV+H VP+
Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPV 166
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDFM 259
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD +
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIV 54
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.3 bits (234), Expect = 3e-21
Identities = 53/121 (43%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Frame = +1
Query: 256 YVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 426
Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 427 LNPKANREKMTQIMFETFNTPAMYVASSRALAVRVRSYHRYRAWTS-----RDGVSHTVP 591
L P +RE +I+FETFN P +Y+A + LA+ T DG +H VP
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVP 188
Query: 592 I 594
+
Sbjct: 189 V 189
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 205
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 87.4 bits (207), Expect = 6e-18
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 LYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 429
LYVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL
Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
Query: 430 NPKANREKMTQIMFETFNTPAMYVASSRAL 519
N + REK ++MFE + PA+++A + L
Sbjct: 135 NTQQQREKAAELMFEKYKVPALFMAKNPVL 164
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 208
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 229 DGRYGTEGLYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 405
D G LY G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 406 VLLTEAPLNPKANREK 453
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 208
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 307 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 483
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 484 TPAMYVASSRALAV 525
Y + L++
Sbjct: 117 VSGFYASEQAVLSL 130
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 211
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/74 (33%), Positives = 44/74 (59%)
Frame = +1
Query: 298 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 477
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 478 FNTPAMYVASSRAL 519
F ++Y+A ++L
Sbjct: 121 FGFSSLYIAHPQSL 134
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 214
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 483
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 484 TPAMYVASSRALAVRVRSYH 543
PA+ A + + H
Sbjct: 145 VPAVAFGVDAAFSYKYNQLH 164
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 35.5 bits (78), Expect = 0.027
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 357 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIKSF-CPIPTITP*WRGLPTIEGNT 187
P L V+ ++ D + + + + YI + P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 186 ARGASSPAKPALHIPEPLSTTNAATSS 106
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 494 CTSHPAVLSLYASGRTTGIVLGL 562
C + AVL+LYA+ RT+GIV+ +
Sbjct: 235 CAVNQAVLALYAARRTSGIVVNI 257
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 494 CTSHPAVLSLYASGRTTGIVLGL 562
C + AVL+LYA+ RT+GIV+ +
Sbjct: 235 CAVNQAVLALYAARRTSGIVVNI 257
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 265 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 444
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 445 REK 453
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 265 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 444
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 445 REK 453
REK
Sbjct: 225 REK 227
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Frame = +3
Query: 414 H*GSPQPQGQQREDDPDHVRN-------IQHARHVRRIQPCSRCTRPVVPPVSCL 557
H GSP+ +G + EDD D + N ARH R + S +R P+ L
Sbjct: 91 HRGSPRVEGDEDEDDVDDIENEFNYAQGANKARHQRHGEEFSSSSRHESQPIPLL 145
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 277 SVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
S PH L+ +L T+HH LMA PS H A + I+
Sbjct: 96 SSPHRLNNLL---TNHHLLMADPSISVAIHHAANFIA 129
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 238 YGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 375
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 219 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 97
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 331 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 480
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,592,171
Number of Sequences: 28952
Number of extensions: 333414
Number of successful extensions: 970
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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