Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0744
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.4  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 176 TRLNYFWGLLFQITRFTFLYVSAQLGKLIIYLLLFC 69
           T  N FW  L+ +T   FL+    +  LII L+L+C
Sbjct: 227 TLANTFWSALYFLT-IIFLFF---IIPLIILLILYC 258


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 620 FKRNFISNRRKHFLNIFFKTKTR 688
           F  N I+ R+KHF +  + ++ R
Sbjct: 244 FSNNVIAERKKHFSSSSYSSRKR 266


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 620 FKRNFISNRRKHFLNIFFKTKTR 688
           F  N I+ R+KHF +  + ++ R
Sbjct: 244 FSNNVIAERKKHFSSSSYSSRKR 266


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -2

Query: 170 LNYFWGLLFQITRFTFLYVSAQLGKLIIYLLLFC*VYRLV 51
           LN F+ ++FQ+    +L+ +  L  +  ++ L   + RLV
Sbjct: 294 LNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLV 333


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 78  QQIND*FTQLRTHIQKSKTSYLKEEAP 158
           +Q+N+ F  LR HI  S  +    + P
Sbjct: 99  KQVNNGFATLRQHIPASVAAAFAPQGP 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,522
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)