Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0743
         (654 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g16566.1 68417.m02507 histidine triad family protein / HIT fa...    60   1e-09
At1g31160.1 68414.m03812 zinc-binding protein, putative / protei...    42   4e-04
At3g56490.1 68416.m06282 zinc-binding protein, putative / protei...    42   5e-04
At5g48545.1 68418.m06002 histidine triad family protein / HIT fa...    36   0.018
At5g25310.1 68418.m03003 exostosin family protein contains Pfam ...    28   6.2  
At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical...    27   8.2  

>At4g16566.1 68417.m02507 histidine triad family protein / HIT
           family protein contains Pfam domain, PF01230: HIT family
           (histidine triad protein family)
          Length = 146

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 26/57 (45%), Positives = 35/57 (61%)
 Frame = +3

Query: 90  CIFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKNY 260
           CIFC I      T +L+ D++V  F+DIKPA++ H L IPK HI  V  L   D++Y
Sbjct: 8   CIFCEIVRNPTTTRLLHTDEKVIAFQDIKPAAQRHYLVIPKEHIPTVNDLQRRDEDY 64



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
 Frame = +2

Query: 242 ERRQE---LLNRMMSISRELLSKNN-LSIEDARFGYHWPPFRSVKHLHLHTIA 388
           +RR E   L+  M+S+ ++LL K+   SI   RFG+H PPF SV HLHLH  A
Sbjct: 58  QRRDEDYSLVRHMLSVGQQLLQKDAPQSIH--RFGFHQPPFNSVDHLHLHCFA 108


>At1g31160.1 68414.m03812 zinc-binding protein, putative / protein
           kinase C inhibitor, putative similar to 14 kDa
           zinc-binding protein (Protein kinase C inhibitor, PKCI)
           [Zea mays] Swiss-Prot:P42856
          Length = 187

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 93  IFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKNYL 263
           IF  I  K   ++I+YED+ V  FRDI P +  H+L IPK   + + SL  A+  ++
Sbjct: 77  IFDKIIAKEIPSDIVYEDENVLAFRDINPQAPVHVLVIPKLR-DGLTSLGKAEPRHV 132


>At3g56490.1 68416.m06282 zinc-binding protein, putative / protein
           kinase C inhibitor, putative similar to 14 kDa
           zinc-binding protein (Protein kinase C inhibitor, PKCI)
           [Zea mays] Swiss-Prot:P42856
          Length = 147

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 21/57 (36%), Positives = 34/57 (59%)
 Frame = +3

Query: 93  IFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKNYL 263
           IF  I +K   + +++EDD+V  FRDI P    HIL IPK   + +  L+ A++ ++
Sbjct: 37  IFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVR-DGLTGLSKAEERHI 92


>At5g48545.1 68418.m06002 histidine triad family protein / HIT
           family protein contains Pfam profile PF01230:HIT domain;
           contains Prosite motif PS00892: HIT family signature.
          Length = 197

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 18/43 (41%), Positives = 19/43 (44%)
 Frame = +3

Query: 90  CIFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRH 218
           C+FC I         LYEDD      D  P S  H L IPK H
Sbjct: 50  CVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLH 92


>At5g25310.1 68418.m03003 exostosin family protein contains Pfam
           profile: PF03016 Exostosin family
          Length = 334

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 651 RSHFNCGEAPLYAFSFLRITIHNIMLWASNLKLT 550
           R HF   + P   F    +T+H+I L   NLKLT
Sbjct: 302 RRHFELNDPP-QRFDAFHLTLHSIWLRRLNLKLT 334


>At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical to
           GI:3426064
          Length = 407

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -2

Query: 353 ETVASDTQSVHLQYSNCF*TATLSIWTSFC*VVLVGARQALDIFDMPFRYSQNMKTTGRF 174
           ET+   ++ VH++ S C+    LS  T     VLVG      +      + +N  TT R 
Sbjct: 120 ETIRFSSKVVHIELSGCYKKVHLSDGTILKTKVLVGCDGVYSVVGKWLGF-KNPATTARL 178

Query: 173 DVTKNAHF 150
            +    HF
Sbjct: 179 AIRGLTHF 186


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,176,542
Number of Sequences: 28952
Number of extensions: 263543
Number of successful extensions: 560
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)