BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0742 (694 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0W6T0 Cluster: Sensor protein; n=1; uncultured methano... 33 6.6 UniRef50_A3IRJ7 Cluster: Sensor protein; n=3; Bacteria|Rep: Sens... 33 8.8 UniRef50_Q7YYR9 Cluster: Similarity to rod-like tail of several ... 33 8.8 >UniRef50_Q0W6T0 Cluster: Sensor protein; n=1; uncultured methanogenic archaeon RC-I|Rep: Sensor protein - Uncultured methanogenic archaeon RC-I Length = 616 Score = 33.1 bits (72), Expect = 6.6 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -3 Query: 548 IFSKVLDAFFIHFSDGNFIVINNQVLQTF 462 IF+ V DA FIH DG+ I +N+++LQ + Sbjct: 134 IFNGVSDAIFIHRLDGSIIEVNDRMLQMY 162 >UniRef50_A3IRJ7 Cluster: Sensor protein; n=3; Bacteria|Rep: Sensor protein - Cyanothece sp. CCY 0110 Length = 3557 Score = 32.7 bits (71), Expect = 8.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -3 Query: 560 DVLKIFSKVLDAFFIHFSDGNFIVINNQVLQTFS*HLHNFL 438 D+ +F+ DA FIH DG F+ IN++V++ N L Sbjct: 2829 DLRTLFNNSYDALFIHDLDGRFLDINDRVVELLGTSRENIL 2869 >UniRef50_Q7YYR9 Cluster: Similarity to rod-like tail of several myosins, possible; n=3; Cryptosporidium|Rep: Similarity to rod-like tail of several myosins, possible - Cryptosporidium parvum Length = 577 Score = 32.7 bits (71), Expect = 8.8 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +1 Query: 511 KCMKNASRTFENIFNTSIKLEQNISQISLLKHNNKFIKIGLSS 639 +C+KN ++ E++ N K+ ++ +S+ K NN F +G S Sbjct: 298 QCVKNIAKLAESVNNLQEKISNHLIGLSIAKSNNSFSVVGSKS 340 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 603,501,382 Number of Sequences: 1657284 Number of extensions: 11744710 Number of successful extensions: 24013 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 22913 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24002 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 54545459628 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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