Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0741
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   1.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   2.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   5.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   5.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   7.7  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 9  LGSLHRQPSSTNNQRHK 59
          LG LHR+P+  N Q  K
Sbjct: 47 LGDLHRKPTYNNLQEMK 63


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 21  HRQPSSTNNQRHKRHATN 74
           + QPS++NN+ H  +  N
Sbjct: 366 NNQPSTSNNRWHNNNGNN 383


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 33  SSTNNQRHKRHA 68
           ++TNNQ H  HA
Sbjct: 315 AATNNQNHHHHA 326


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 158 PGALHVSTSSDPRATTAGG 102
           PG L V+T  DP +    G
Sbjct: 298 PGRLAVNTGQDPESLLING 316


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 158 PGALHVSTSSDPRATTAGG 102
           PG L V+T  DP +    G
Sbjct: 298 PGRLAVNTGQDPESLLING 316


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 119 PGDQMTWKRVAH 154
           P +Q+TW+R  H
Sbjct: 592 PREQLTWRRNFH 603


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 119 PGDQMTWKRVAH 154
           P +Q+TW+R  H
Sbjct: 484 PREQLTWRRNFH 495


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 168  YSLKTPAEYG*KSVTHATI 224
            YS     +YG  SVTH  I
Sbjct: 1374 YSCHVENDYGQDSVTHQLI 1392


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 221 NFYDFACGSFLKILGSQTT 277
           NF+D    + L +LG+  T
Sbjct: 324 NFFDIERSTILSVLGTACT 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,999
Number of Sequences: 336
Number of extensions: 1934
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)