Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0741
         (330 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   1.3  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    22   6.9  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    21   9.1  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    21   9.1  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    21   9.1  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 149 LHVSTSSDPRATTAGGM 99
           LH   S+ P+AT AGG+
Sbjct: 912 LHYHRSASPKATVAGGL 928


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +1

Query: 91  SSSMPPAVVARGSDDVETCSAPGCIHTASRLLLNMDEKV*PMRQFL---RLCLRVILENT 261
           SSS  PA+V  GS   E     G +H  ++   N+   +  M   +     C+   L  T
Sbjct: 84  SSSKEPALVVGGSKLQEALKVAGELHAYTKDRNNVHHPIKKMAVSILSALACVERELMTT 143

Query: 262 RIPDDKT 282
           R+  ++T
Sbjct: 144 RLRAERT 150


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 161 HPGALHVSTSSDPRATTAGG 102
           +PG L V+T  DP +    G
Sbjct: 339 YPGRLAVNTGQDPESLLING 358


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 161 HPGALHVSTSSDPRATTAGG 102
           +PG L V+T  DP +    G
Sbjct: 339 YPGRLAVNTGQDPESLLING 358


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 127 SDDVETCSAPGCIHT 171
           +DD E+CS+  C+ T
Sbjct: 120 NDDQESCSSNECVST 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,696
Number of Sequences: 2352
Number of extensions: 7179
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)