BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0741 (330 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 24 1.3 AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 22 6.9 AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 21 9.1 AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 21 9.1 AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 21 9.1 >AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoisomerase protein. Length = 1039 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -2 Query: 149 LHVSTSSDPRATTAGGM 99 LH S+ P+AT AGG+ Sbjct: 912 LHYHRSASPKATVAGGL 928 >AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein protein. Length = 492 Score = 21.8 bits (44), Expect = 6.9 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +1 Query: 91 SSSMPPAVVARGSDDVETCSAPGCIHTASRLLLNMDEKV*PMRQFL---RLCLRVILENT 261 SSS PA+V GS E G +H ++ N+ + M + C+ L T Sbjct: 84 SSSKEPALVVGGSKLQEALKVAGELHAYTKDRNNVHHPIKKMAVSILSALACVERELMTT 143 Query: 262 RIPDDKT 282 R+ ++T Sbjct: 144 RLRAERT 150 >AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B protein. Length = 755 Score = 21.4 bits (43), Expect = 9.1 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = -2 Query: 161 HPGALHVSTSSDPRATTAGG 102 +PG L V+T DP + G Sbjct: 339 YPGRLAVNTGQDPESLLING 358 >AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A protein. Length = 753 Score = 21.4 bits (43), Expect = 9.1 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = -2 Query: 161 HPGALHVSTSSDPRATTAGG 102 +PG L V+T DP + G Sbjct: 339 YPGRLAVNTGQDPESLLING 358 >AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking protein. Length = 932 Score = 21.4 bits (43), Expect = 9.1 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +1 Query: 127 SDDVETCSAPGCIHT 171 +DD E+CS+ C+ T Sbjct: 120 NDDQESCSSNECVST 134 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 371,696 Number of Sequences: 2352 Number of extensions: 7179 Number of successful extensions: 7 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 563,979 effective HSP length: 56 effective length of database: 432,267 effective search space used: 22910151 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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