Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0741
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040652-4|AAB95021.2| 736|Caenorhabditis elegans Hypothetical ... 44 3e-05
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 42 8e-05
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 42 8e-05
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 36 0.007
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 33 0.064
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 33 0.064
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 33 0.064
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 33 0.064
Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical pr... 31 0.15
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 31 0.20
AF016665-6|AAL02468.1| 655|Caenorhabditis elegans Hypothetical ... 31 0.20
U23519-8|AAK31503.3| 734|Caenorhabditis elegans Hypothetical pr... 30 0.45
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 29 0.60
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 29 0.60
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 28 1.4
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 28 1.4
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 1.4
U80029-10|AAB37589.1| 460|Caenorhabditis elegans Hypothetical p... 27 2.4
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 27 2.4
AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 27 2.4
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 27 2.4
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 27 2.4
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 27 2.4
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 27 2.4
AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical ... 27 2.4
Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical p... 27 3.2
Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical p... 27 3.2
AF038610-2|AAB92034.1| 457|Caenorhabditis elegans Hypothetical ... 27 3.2
U80027-12|AAC48126.2| 493|Caenorhabditis elegans Hypothetical p... 27 4.2
U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical ... 27 4.2
AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical ... 27 4.2
AF039045-7|AAB94207.1| 333|Caenorhabditis elegans Hypothetical ... 26 5.5
AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical ... 26 5.5
AC006723-6|AAF59425.1| 492|Caenorhabditis elegans Hypothetical ... 26 5.5
AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical ... 26 7.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 25 9.7
U28731-2|AAA68297.1| 658|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 25 9.7
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 25 9.7
>AF040652-4|AAB95021.2| 736|Caenorhabditis elegans Hypothetical
protein T05A8.4 protein.
Length = 736
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 130 DDVETCSAPGCIHTASRLLLNMDEKV*PMRQFLRLCLRVILENTRIPDDKTSVNTFSIIT 309
D + C +PGCI TAS +L +M+ V P F ++ IPDD SV+ F +
Sbjct: 48 DSSDVCLSPGCIKTASVILSSMNSSVDPCDDFYEFACGQWIKGHPIPDDAPSVSNFENLG 107
Query: 310 DQLQ 321
L+
Sbjct: 108 QDLE 111
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 42.3 bits (95), Expect = 8e-05
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 139 ETCSAPGCIHTASRLLLNMDEKV*PMRQFLRLCLRVILENTRIPDDKTSVNTFSIITDQL 318
E CS PGC+ A+ L M+ V P F + IPDD TF+ +Q+
Sbjct: 159 EVCSTPGCVRAATHFLNAMNTSVDPCDDFFEFACGQWNDQHPIPDDMYGFGTFAYAREQV 218
Query: 319 QEQI 330
++Q+
Sbjct: 219 RQQL 222
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 42.3 bits (95), Expect = 8e-05
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 139 ETCSAPGCIHTASRLLLNMDEKV*PMRQFLRLCLRVILENTRIPDDKTSVNTFSIITDQL 318
E CS PGC+ A+ L M+ V P F + IPDD TF+ +Q+
Sbjct: 159 EVCSTPGCVRAATHFLNAMNTSVDPCDDFFEFACGQWNDQHPIPDDMYGFGTFAYAREQV 218
Query: 319 QEQI 330
++Q+
Sbjct: 219 RQQL 222
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
protein F54F11.2 protein.
Length = 1589
Score = 35.9 bits (79), Expect = 0.007
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 209 DPCDNFYDFACGSFLKILGSQTTRPQ 286
DPCD+FY +ACG+F + + T R Q
Sbjct: 885 DPCDDFYSYACGNFNQSVSFYTARAQ 910
Score = 28.3 bits (60), Expect = 1.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 209 DPCDNFYDFACGSF 250
DPC++FY + CG+F
Sbjct: 113 DPCNDFYAYTCGNF 126
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 32.7 bits (71), Expect = 0.064
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 DPCDNFYDFACGSFL 253
+PCDNFY FACG ++
Sbjct: 125 EPCDNFYQFACGGWI 139
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 145 CSAPGCIHTASRLLLNMDEKV*PMRQF 225
C++ C+ TASRLL +D+ V P F
Sbjct: 104 CTSEECVMTASRLLKRVDQSVEPCDNF 130
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 32.7 bits (71), Expect = 0.064
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 DPCDNFYDFACGSFL 253
+PCDNFY FACG ++
Sbjct: 89 EPCDNFYQFACGGWI 103
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 145 CSAPGCIHTASRLLLNMDEKV*PMRQF 225
C++ C+ TASRLL +D+ V P F
Sbjct: 68 CTSEECVMTASRLLKRVDQSVEPCDNF 94
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 32.7 bits (71), Expect = 0.064
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 DPCDNFYDFACGSFL 253
+PCDNFY FACG ++
Sbjct: 125 EPCDNFYQFACGGWI 139
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 145 CSAPGCIHTASRLLLNMDEKV*PMRQF 225
C++ C+ TASRLL +D+ V P F
Sbjct: 104 CTSEECVMTASRLLKRVDQSVEPCDNF 130
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 32.7 bits (71), Expect = 0.064
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 DPCDNFYDFACGSFL 253
+PCDNFY FACG ++
Sbjct: 89 EPCDNFYQFACGGWI 103
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 145 CSAPGCIHTASRLLLNMDEKV*PMRQF 225
C++ C+ TASRLL +D+ V P F
Sbjct: 68 CTSEECVMTASRLLKRVDQSVEPCDNF 94
>Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical
protein T16A9.4 protein.
Length = 769
Score = 31.5 bits (68), Expect = 0.15
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +2
Query: 203 KCDPCDNFYDFACGSF 250
K +PC++FY+FACG++
Sbjct: 105 KINPCEDFYEFACGNY 120
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 31.1 bits (67), Expect = 0.20
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 209 DPCDNFYDFACG 244
DPCDNF+ FACG
Sbjct: 59 DPCDNFHQFACG 70
>AF016665-6|AAL02468.1| 655|Caenorhabditis elegans Hypothetical
protein C49D10.10 protein.
Length = 655
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = +2
Query: 209 DPCDNFYDFACGSFLK---ILGSQTTRPQ 286
DPC+NFY ACG + + I GS+T + Q
Sbjct: 83 DPCENFYQAACGKYNEHNVIDGSRTAQKQ 111
>U23519-8|AAK31503.3| 734|Caenorhabditis elegans Hypothetical
protein F26G1.6 protein.
Length = 734
Score = 29.9 bits (64), Expect = 0.45
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2
Query: 200 KKCDPCDNFYDFACGSF 250
+ +PC++FY+FACG +
Sbjct: 109 RDANPCEDFYEFACGKY 125
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = +1
Query: 124 GSDDVETCSAPGCIHTASRLLLNMDEKV*PMRQFLRLCLRVILENTRIPDDKTSVNTFSI 303
GSD+ TC P CI A+ L NM+ P F I + + V S
Sbjct: 85 GSDN-STCLTPECIRLAASYLNNMNRDANPCEDFYEFACGKYATRKVIAEHEKKVTVLSE 143
Query: 304 ITDQLQEQI 330
+ ++ +
Sbjct: 144 MKKEMDRHL 152
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 178 RLLLNMDEKV*PMRQFLRLCLRVILENTRIPDDKTSVNTFSIITDQLQEQ 327
RLL + +++ +R LR I+EN RIP++ S SI+ +L ++
Sbjct: 432 RLLAHTNDEATNVRSKAVSLLRNIMENRRIPEEFESCGLLSIVGSRLNDK 481
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 178 RLLLNMDEKV*PMRQFLRLCLRVILENTRIPDDKTSVNTFSIITDQLQEQ 327
RLL + +++ +R LR I+EN RIP++ S SI+ +L ++
Sbjct: 388 RLLAHTNDEATNVRSKAVSLLRNIMENRRIPEEFESCGLLSIVGSRLNDK 437
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 28.3 bits (60), Expect = 1.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 209 DPCDNFYDFACGSFLK 256
DPC +FY F C FL+
Sbjct: 84 DPCQDFYAFTCNKFLQ 99
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 47 PAT*ATCHKLVN*DFLHPCHLQWSPGDQMTWKR 145
P+ A HK V D + C + +P ++TW R
Sbjct: 45 PSKNAIIHKKVGADLIFECKAEGAPSPEITWSR 77
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 209 DPCDNFYDFACG 244
DPCDNFY CG
Sbjct: 97 DPCDNFYQSVCG 108
>U80029-10|AAB37589.1| 460|Caenorhabditis elegans Hypothetical
protein T20D4.8 protein.
Length = 460
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 209 DPCDNFYDFACGSFLKIL 262
DPC++FYD+ C + +I+
Sbjct: 25 DPCNDFYDYVCTNDTRII 42
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 239 KQSRRNCRMGHTFSSIFSRSLEAV*IHPGALHVSTSSDPR 120
+ SR R G T S+ L+ I P HV+ SSDP+
Sbjct: 95 QHSRVEVRPGETARDAISKLLKKRNITPQLCHVNASSDPK 134
>AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3
protein.
Length = 769
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 239 KQSRRNCRMGHTFSSIFSRSLEAV*IHPGALHVSTSSDPR 120
+ SR R G T S+ L+ I P HV+ SSDP+
Sbjct: 51 QHSRVEVRPGETARDAISKLLKKRNITPQLCHVNASSDPK 90
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 239 KQSRRNCRMGHTFSSIFSRSLEAV*IHPGALHVSTSSDPR 120
+ SR R G T S+ L+ I P HV+ SSDP+
Sbjct: 95 QHSRVEVRPGETARDAISKLLKKRNITPQLCHVNASSDPK 134
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 239 KQSRRNCRMGHTFSSIFSRSLEAV*IHPGALHVSTSSDPR 120
+ SR R G T S+ L+ I P HV+ SSDP+
Sbjct: 95 QHSRVEVRPGETARDAISKLLKKRNITPQLCHVNASSDPK 134
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 239 KQSRRNCRMGHTFSSIFSRSLEAV*IHPGALHVSTSSDPR 120
+ SR R G T S+ L+ I P HV+ SSDP+
Sbjct: 137 QHSRVEVRPGETARDAISKLLKKRNITPQLCHVNASSDPK 176
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 239 KQSRRNCRMGHTFSSIFSRSLEAV*IHPGALHVSTSSDPR 120
+ SR R G T S+ L+ I P HV+ SSDP+
Sbjct: 95 QHSRVEVRPGETARDAISKLLKKRNITPQLCHVNASSDPK 134
>AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical
protein Y19D10B.5 protein.
Length = 575
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 209 DPCDNFYDFACGSFLKIL 262
DPC++FYD+ C + +I+
Sbjct: 38 DPCNDFYDYVCTNDTRII 55
>Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 27.1 bits (57), Expect = 3.2
Identities = 7/15 (46%), Positives = 14/15 (93%)
Frame = +2
Query: 209 DPCDNFYDFACGSFL 253
DPCD+F+++AC +++
Sbjct: 85 DPCDDFFEYACRAWV 99
>Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 27.1 bits (57), Expect = 3.2
Identities = 7/15 (46%), Positives = 14/15 (93%)
Frame = +2
Query: 209 DPCDNFYDFACGSFL 253
DPCD+F+++AC +++
Sbjct: 85 DPCDDFFEYACRAWV 99
>AF038610-2|AAB92034.1| 457|Caenorhabditis elegans Hypothetical
protein F09D12.2 protein.
Length = 457
Score = 27.1 bits (57), Expect = 3.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 209 DPCDNFYDFACGSFLKIL 262
DPC++FYD+ C +I+
Sbjct: 12 DPCNDFYDYVCSKDNRII 29
>U80027-12|AAC48126.2| 493|Caenorhabditis elegans Hypothetical
protein T28A11.17 protein.
Length = 493
Score = 26.6 bits (56), Expect = 4.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 209 DPCDNFYDFACGS 247
DPC++FYD+ C +
Sbjct: 25 DPCNDFYDYVCSN 37
>U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical
protein C53B7.7 protein.
Length = 437
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 203 KCDPCDNFYDFAC 241
K DPCD+FY AC
Sbjct: 34 KSDPCDDFYRHAC 46
>AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical
protein C17B7.8 protein.
Length = 558
Score = 26.6 bits (56), Expect = 4.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 209 DPCDNFYDFACGS 247
DPC++FYD+ C +
Sbjct: 18 DPCNDFYDYVCSN 30
>AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical
protein T06D4.3 protein.
Length = 743
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 209 DPCDNFYDFACGSF 250
DPC+NF ACG F
Sbjct: 108 DPCENFEKSACGKF 121
Score = 26.2 bits (55), Expect = 5.5
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +1
Query: 73 TSELRLSSSMPPAVVARGSDDVETCSAPGCIHTASRLLLNMDEKV*PMRQFLRLCLRVIL 252
TS L SSS PP++ C P C+ A +LL D V P F +
Sbjct: 71 TSTLPNSSSRPPSI--------PICDTPECVTLAHQLLNYRDISVDPCENFEKSACGKFR 122
Query: 253 ENT 261
EN+
Sbjct: 123 ENS 125
>AF039045-7|AAB94207.1| 333|Caenorhabditis elegans Hypothetical
protein F15E11.11 protein.
Length = 333
Score = 26.2 bits (55), Expect = 5.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 209 DPCDNFYDFAC 241
DPC++FYD+ C
Sbjct: 24 DPCNDFYDYVC 34
>AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical
protein F18A12.1 protein.
Length = 726
Score = 26.2 bits (55), Expect = 5.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 209 DPCDNFYDFACGSF 250
DPC +FY ACG +
Sbjct: 106 DPCQDFYKAACGKY 119
>AC006723-6|AAF59425.1| 492|Caenorhabditis elegans Hypothetical
protein Y19D10B.6 protein.
Length = 492
Score = 26.2 bits (55), Expect = 5.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 209 DPCDNFYDFAC 241
DPC++FYD+ C
Sbjct: 24 DPCNDFYDYVC 34
>AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical
protein F18A12.6 protein.
Length = 649
Score = 25.8 bits (54), Expect = 7.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 209 DPCDNFYDFACGSF 250
DPC +FY CG F
Sbjct: 98 DPCQDFYQHFCGKF 111
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 19 FIASLLLRTTSDISDMPQTSELRLSSSMPPAV 114
F +S T SD+S + TS LSSS+P V
Sbjct: 1361 FASSTSGSTISDVSSVSTTSLAPLSSSLPSTV 1392
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 158 PGALHVSTSSDPRATTAGGMDEESLSSLV 72
PG +HVS ++ GG D ES ++
Sbjct: 1031 PGKIHVSAEANRMLHLVGGFDTESRGEVI 1059
>U28731-2|AAA68297.1| 658|Caenorhabditis elegans Hypothetical
protein F12A10.4 protein.
Length = 658
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 46 TSDISDMPQTSELRLSSSMPPAVVARGSDDVETCS-APGCIHT 171
T SD+ T +LS+++P +V GS++ E + G +HT
Sbjct: 362 TEVASDLEDTCLHQLSTTIPGKIVLYGSEEPEALNLLNGMLHT 404
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 79 ELRLSSSMPPAVVARGSDDVETCS 150
+L +SS PP + G DD + C+
Sbjct: 1165 QLTFTSSRPPQTLIAGRDDAQMCT 1188
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 79 ELRLSSSMPPAVVARGSDDVETCS 150
+L +SS PP + G DD + C+
Sbjct: 1090 QLTFTSSRPPQTLIAGRDDAQMCT 1113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,293,581
Number of Sequences: 27780
Number of extensions: 171246
Number of successful extensions: 373
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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