Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0739
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 6/12 (50%), Positives = 6/12 (50%)
 Frame = +3

Query: 507 WPSWCLYRPSTC 542
           WP WC   P  C
Sbjct: 618 WPVWCAQNPGMC 629


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 6/12 (50%), Positives = 6/12 (50%)
 Frame = +3

Query: 507 WPSWCLYRPSTC 542
           WP WC   P  C
Sbjct: 571 WPLWCSQNPGKC 582


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 124 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 154


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K G    PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
 Frame = +3

Query: 129 EDPDRKWCY*NTARGNARKIYRGEKG*DPTAQGNARRSTYR--LGG-LKTVKILKK--PE 293
           ++PD KW   ++++   R  YR     D   +   R   +R  LG  L  VK++    P+
Sbjct: 223 DEPDHKWKKNDSSKKKTRYYYRSV---DDVIEKGKRPGAFRTTLGSELSKVKVIDMTGPQ 279

Query: 294 PTVGEG-EVLIRVKA-CGL-NFQDLIVRQGAIDSPPKTPF---ILGFECAGEIEQVGENV 455
             V  G   L  +KA  G+ +F+D++ ++ +  + P+      +L   C  +I ++  N 
Sbjct: 280 QRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFTLPEIQHNLDVLVDMCEQDIIRIDRN- 338

Query: 456 TNFKVGDQVVAL 491
           T F   D++VAL
Sbjct: 339 TRFN-QDKIVAL 349


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/37 (18%), Positives = 19/37 (51%)
 Frame = +1

Query: 379 STLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWL 489
           S +H++   ++ +N       LAK+   + + T +++
Sbjct: 101 SFMHKKSFKNFVNNVAALDETLAKLGQYINYETDYYV 137


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 437 LDFTSAFEAQDERSLRWRVDGALTNYQILEV*AAGFHAN 321
           + F+S    +  RSL     GALT + ++     G H N
Sbjct: 353 IKFSSFGMLKISRSLLTSFGGALTTFLVILFQYGGIHGN 391


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +3

Query: 3   VVLPAGSLVRASFAAERYSFRSTRPYH 83
           V +P G++V      + Y++ +  P+H
Sbjct: 509 VNIPLGTVVEMVLIDKGYAYDANHPFH 535


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 573 SRADIPSGSAYTYWAGTDTSSAKRGTRGEPP 481
           S A   S ++ T  AGT+ +++K      PP
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSSQSSNPP 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,105
Number of Sequences: 336
Number of extensions: 3072
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)