Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0736
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro...    30   2.9  
AY051885-1|AAK93309.1|  731|Drosophila melanogaster LD37351p pro...    30   2.9  
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA...    30   2.9  

>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p protein.
          Length = 1199

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 196  ECRCRQKSSCPKGLDVRCIRVERRTGVRISGGY 98
            E +  QKS C KG D  C  +E  T +    GY
Sbjct: 928  ESKTDQKSDCKKGPDSECTEIEEETEMLSEKGY 960


>AY051885-1|AAK93309.1|  731|Drosophila melanogaster LD37351p
           protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 196 ECRCRQKSSCPKGLDVRCIRVERRTGVRISGGY 98
           E +  QKS C KG D  C  +E  T +    GY
Sbjct: 460 ESKTDQKSDCKKGPDSECTEIEEETEMLSEKGY 492


>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
            isoform A protein.
          Length = 1199

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 196  ECRCRQKSSCPKGLDVRCIRVERRTGVRISGGY 98
            E +  QKS C KG D  C  +E  T +    GY
Sbjct: 928  ESKTDQKSDCKKGPDSECTEIEEETEMLSEKGY 960


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,392,251
Number of Sequences: 53049
Number of extensions: 519395
Number of successful extensions: 849
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)