Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0736
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.4  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   4.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.3  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   7.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 287 FLTPHNLSLNVTETKFVNKYDIFLY 213
           F+ P+N ++ V   +F++   IFLY
Sbjct: 131 FIAPNNGAVKVLANEFLSILPIFLY 155


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 287 FLTPHNLSLNVTETKFVNKYDIFLY 213
           F+ P+N ++ V   +F++   IFLY
Sbjct: 169 FIAPNNGAVKVLANEFLSILPIFLY 193


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 563 PKLTNRRKIVSRHND 607
           P+LTNR+ +V  H++
Sbjct: 110 PELTNRKSVVFHHDN 124


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 196 ECRCRQKSSCPKGLDVRCI 140
           EC   +K S  KG+ V CI
Sbjct: 45  ECDEMKKDSAVKGIPVSCI 63


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 196 ECRCRQKSSCPKGLDVRCI 140
           EC   +K S  KG+ V CI
Sbjct: 45  ECDEMKKDSAVKGIPVSCI 63


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 196 ECRCRQKSSCPKGLDVRCI 140
           EC   +K S  KG+ V CI
Sbjct: 45  ECDEMKKDSAVKGIPVSCI 63


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 563 PKLTNRRKIVSRHND 607
           P+LTNR+ +V  H++
Sbjct: 232 PELTNRKGVVFHHDN 246


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 194 FQYIIQRIKIYHIYSQISSQL 256
           F Y I  I I + YSQI S +
Sbjct: 218 FSYCIPMILIIYYYSQIVSHV 238


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 222 YIIFIHKFRLSYVQA*IVRCQKFKKLLD*NRRHLINKIKWR 344
           Y  +   FRL++ +    +C K +  LD + R L     W+
Sbjct: 359 YAFYSADFRLAFWRLTCRKCFKSRTNLDPSNRKLPAPANWK 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,056
Number of Sequences: 438
Number of extensions: 3677
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)