Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0735
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   0.50 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   0.50 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   0.50 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   0.50 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   0.50 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   0.50 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   0.50 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   0.50 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   0.67 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   3.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.2  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 93  ATKSSGLTSPLSVSTSPPGKPA 114


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKPS 267
           AT   G+T+     T PP KP+
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKPA 158


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 202 ATSGIGVTNTTDAKTEPPSKP 264
           AT   G+T+     T PP KP
Sbjct: 137 ATKSSGLTSPLSVSTSPPGKP 157


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 294 QLLLKSHLAAWFAWWLSFSICSIRHTNTTCSRC 196
           Q+ +   L      W+SF +  + H N T  RC
Sbjct: 131 QIFITCELFFVILLWISFFLNFMLHCNNTTWRC 163


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 237 ICSIRHTNTTCSRCNSSKPEA 175
           I S  +TNT+ S  NS+KP +
Sbjct: 423 ITSPSNTNTSTSSTNSNKPNS 443


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 219 CDEYYRC 239
           CD+YYRC
Sbjct: 488 CDKYYRC 494


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/42 (23%), Positives = 17/42 (40%)
 Frame = -2

Query: 324 FVS*QIL*MNQLLLKSHLAAWFAWWLSFSICSIRHTNTTCSR 199
           F S  ++ +N  +   H   W  W LS +  ++      C R
Sbjct: 447 FESPPVVFLNDFISHQHAWIWLLWLLSQTWITLHIWTPKCER 488


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/42 (23%), Positives = 17/42 (40%)
 Frame = -2

Query: 324 FVS*QIL*MNQLLLKSHLAAWFAWWLSFSICSIRHTNTTCSR 199
           F S  ++ +N  +   H   W  W LS +  ++      C R
Sbjct: 447 FESPPVVFLNDFISHQHAWIWLLWLLSQTWITLHIWTPKCER 488


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/42 (23%), Positives = 17/42 (40%)
 Frame = -2

Query: 324 FVS*QIL*MNQLLLKSHLAAWFAWWLSFSICSIRHTNTTCSR 199
           F S  ++ +N  +   H   W  W LS +  ++      C R
Sbjct: 447 FESPPVVFLNDFISHQHAWIWLLWLLSQTWITLHIWTPKCER 488


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/42 (23%), Positives = 17/42 (40%)
 Frame = -2

Query: 324 FVS*QIL*MNQLLLKSHLAAWFAWWLSFSICSIRHTNTTCSR 199
           F S  ++ +N  +   H   W  W LS +  ++      C R
Sbjct: 447 FESPPVVFLNDFISHQHAWIWLLWLLSQTWITLHIWTPKCER 488


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 81  HWHGHY 98
           HWHGH+
Sbjct: 134 HWHGHH 139


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 12  YWVGSEFWSWYSNYSNRVWT 71
           +W  +E+ +W   Y+N++ T
Sbjct: 493 FWGTTEYHNWRVVYNNKIPT 512


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 216 NTTCSRCNSSKPEA*C 169
           N   +RCN  +P+A C
Sbjct: 454 NPLDARCNEIRPDAIC 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,958
Number of Sequences: 336
Number of extensions: 1652
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)