Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0735
         (412 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113411-1|AAI13412.1|  225|Homo sapiens proteoglycan 3 protein.       29   7.9  
BC101613-1|AAI01614.1|  225|Homo sapiens proteoglycan 3 protein.       29   7.9  
BC069126-1|AAH69126.1|  225|Homo sapiens proteoglycan 3 protein.       29   7.9  
AY358930-1|AAQ89289.1|  225|Homo sapiens PRG3 protein.                 29   7.9  
AF304354-1|AAG41952.1|  225|Homo sapiens proteoglycan 3 protein.       29   7.9  
AF132209-1|AAD24471.1|  225|Homo sapiens prepro-major basic prot...    29   7.9  

>BC113411-1|AAI13412.1|  225|Homo sapiens proteoglycan 3 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  WVGSEFWSWYSNYSNRVWTIGSHWHGHY 98
           W+G     W+  +    WT GSHW+  Y
Sbjct: 161 WIGGNLRGWFL-WKRFCWTDGSHWNFAY 187


>BC101613-1|AAI01614.1|  225|Homo sapiens proteoglycan 3 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  WVGSEFWSWYSNYSNRVWTIGSHWHGHY 98
           W+G     W+  +    WT GSHW+  Y
Sbjct: 161 WIGGNLRGWFL-WKRFCWTDGSHWNFAY 187


>BC069126-1|AAH69126.1|  225|Homo sapiens proteoglycan 3 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  WVGSEFWSWYSNYSNRVWTIGSHWHGHY 98
           W+G     W+  +    WT GSHW+  Y
Sbjct: 161 WIGGNLRGWFL-WKRFCWTDGSHWNFAY 187


>AY358930-1|AAQ89289.1|  225|Homo sapiens PRG3 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  WVGSEFWSWYSNYSNRVWTIGSHWHGHY 98
           W+G     W+  +    WT GSHW+  Y
Sbjct: 161 WIGGNLRGWFL-WKRFCWTDGSHWNFAY 187


>AF304354-1|AAG41952.1|  225|Homo sapiens proteoglycan 3 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  WVGSEFWSWYSNYSNRVWTIGSHWHGHY 98
           W+G     W+  +    WT GSHW+  Y
Sbjct: 161 WIGGNLRGWFL-WKRFCWTDGSHWNFAY 187


>AF132209-1|AAD24471.1|  225|Homo sapiens prepro-major basic protein
           homolog protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  WVGSEFWSWYSNYSNRVWTIGSHWHGHY 98
           W+G     W+  +    WT GSHW+  Y
Sbjct: 161 WIGGNLRGWFL-WKRFCWTDGSHWNFAY 187


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,696,279
Number of Sequences: 237096
Number of extensions: 981585
Number of successful extensions: 6060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6060
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)